The application of rumen simulation technique (RUSITEC) for studying dynamics of the bacterial community and metabolome in rumen fluid and the effects of a challenge with Clostridium perfringens

• Stefanie U. Wetzels ,

  Contributed equally to this work with: Stefanie U. Wetzels, Melanie Eger

  Roles Data curation, Methodology, Software, Visualization, Writing – original draft

  Affiliation Institute for Milk Hygiene, Milk Technology and Food Science, Department for Farm Animals and Veterinary Public Health, University of Veterinary Medicine Vienna, Vienna, Austria

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• Melanie Eger ,

  Contributed equally to this work with: Stefanie U. Wetzels, Melanie Eger

  Roles Data curation, Formal analysis, Investigation, Methodology, Writing – original draft

  Affiliation Institute for Physiology, University of Veterinary Medicine Hannover, Hannover, Germany

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• Marion Burmester,

  Roles Data curation, Formal analysis, Methodology

  Affiliation Institute for Physiology, University of Veterinary Medicine Hannover, Hannover, Germany

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• Lothar Kreienbrock,

  Roles Data curation, Formal analysis, Validation, Writing – review & editing

  Affiliation Institute for Biometry, Epidemiology and Information Processing, University of Veterinary Medicine Hannover, Hannover, Germany

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• Amir Abdulmawjood,

  Roles Data curation, Formal analysis, Methodology, Writing – review & editing

  Affiliation Institute for Food Quality and Food Safety, Research Center for Emerging Infections and Zoonoses (RIZ), University of Veterinary Medicine Hannover, Hannover, Germany

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• Beate Pinior,

  Roles Formal analysis, Methodology, Software, Visualization, Writing – review & editing

  Affiliation Institute for Veterinary Public Health, Department for Farm Animals and Veterinary Public Health, University of Veterinary Medicine Vienna, Vienna, Austria

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• Martin Wagner,

  Roles Project administration, Resources, Writing – review & editing

  Affiliation Institute for Milk Hygiene, Milk Technology and Food Science, Department for Farm Animals and Veterinary Public Health, University of Veterinary Medicine Vienna, Vienna, Austria

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• Gerhard Breves ,

  Roles Conceptualization, Funding acquisition, Project administration, Supervision, Writing – review & editing

  * E-mail: Gerhard.Breves@tiho-hannover.de (GB); Evelyne.Mann@vetmeduni.ac.at (EM)

  Affiliation Institute for Physiology, University of Veterinary Medicine Hannover, Hannover, Germany

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• Evelyne Mann

  Roles Conceptualization, Methodology, Project administration, Software, Supervision, Validation, Writing – original draft

  * E-mail: Gerhard.Breves@tiho-hannover.de (GB); Evelyne.Mann@vetmeduni.ac.at (EM)

  Affiliation Institute for Milk Hygiene, Milk Technology and Food Science, Department for Farm Animals and Veterinary Public Health, University of Veterinary Medicine Vienna, Vienna, Austria

  http://orcid.org/0000-0002-2253-5247

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