Design and validation of a 90K SNP genotyping assay for the water buffalo (Bubalus bubalis)

• Daniela Iamartino ,

  Roles Conceptualization, Formal analysis, Funding acquisition, Methodology, Project administration, Supervision, Validation, Visualization, Writing – original draft, Writing – review & editing

  * E-mail: iamartino.d@aia.it

  Affiliations AIA-LGS Associazione Italiana Allevatori–Laboratorio Genetica e Servizi, Cremona, Italy, Fondazione Parco Tecnologico Padano, Lodi, Italy

  http://orcid.org/0000-0003-1421-6884

  ⨯
• Ezequiel L. Nicolazzi,

  Roles Conceptualization, Data curation, Formal analysis, Software, Validation, Visualization, Writing – original draft

  Current address: Council on Dairy Cattle Breeding, 4201 Northview Dr. One Town Centre, Bowie, MD, United States of America

  Affiliation Bioinformatics core, Parco Tecnologico Padano, Lodi, Italy

  ⨯
• Curtis P. Van Tassell,

  Roles Formal analysis, Methodology, Software

  Affiliation Animal Genomics and Improvement Laboratory, BARC, USDA-ARS, Beltsville, Maryland, United States of America

  http://orcid.org/0000-0002-8416-2087

  ⨯
• James M. Reecy,

  Roles Data curation, Software, Supervision

  Affiliation Department of Animal Science, Iowa State University, Ames, IA, United States of America

  http://orcid.org/0000-0003-4602-0990

  ⨯
• Eric R. Fritz-Waters,

  Roles Investigation, Software

  Affiliation Department of Animal Science, Iowa State University, Ames, IA, United States of America

  ⨯
• James E. Koltes,

  Roles Investigation, Software

  Current address: Department of Animal Science, University of Arkansas, Fayetteville, AR, United States of America

  Affiliation Department of Animal Science, Iowa State University, Ames, IA, United States of America

  ⨯
• Stefano Biffani,

  Roles Formal analysis, Validation

  Affiliation Fondazione Parco Tecnologico Padano, Lodi, Italy

  ⨯
• Tad S. Sonstegard,

  Roles Methodology, Resources, Supervision

  Current address: Recombinetics Inc., St. Paul, MN, United States of America

  Affiliation Animal Genomics and Improvement Laboratory, BARC, USDA-ARS, Beltsville, Maryland, United States of America

  http://orcid.org/0000-0002-6446-9276

  ⨯
• Steven G. Schroeder,

  Roles Data curation, Methodology

  Affiliation Animal Genomics and Improvement Laboratory, BARC, USDA-ARS, Beltsville, Maryland, United States of America

  http://orcid.org/0000-0001-9103-5150

  ⨯
• Paolo Ajmone-Marsan,

  Roles Resources, Supervision, Validation

  Affiliation Institute of Zootechnics, Università Cattolica del S. Cuore, Piacenza, Italy

  ⨯
• Riccardo Negrini,

  Roles Resources

  Affiliations AIA-LGS Associazione Italiana Allevatori–Laboratorio Genetica e Servizi, Cremona, Italy, Institute of Zootechnics, Università Cattolica del S. Cuore, Piacenza, Italy

  ⨯
• Rolando Pasquariello,

  Roles Methodology

  Affiliation Fondazione Parco Tecnologico Padano, Lodi, Italy

  http://orcid.org/0000-0003-3191-7009

  ⨯
• Paola Ramelli,

  Roles Methodology

  Affiliation Fondazione Parco Tecnologico Padano, Lodi, Italy

  ⨯
• Angelo Coletta,

  Roles Data curation, Resources

  Affiliation ANASB-Associazione Nazionale Allevatori Specie Bufalina, Centurano—Caserta, Italy

  http://orcid.org/0000-0003-3250-5102

  ⨯
• José F. Garcia,

  Roles Resources

  Affiliation Universidade Estadual Paulista (UNESP), Câmpus de Araçatuba, Sao Paulo, Brazil

  ⨯
• Ahmad Ali,

  Roles Resources

  Affiliation COMSATS Institute of Information Technology, Sahiwal, Pakistan

  ⨯
• Luigi Ramunno,

  Roles Resources

  Affiliation Dipartimento di Scienze Zootecniche ed Ispezione degli Alimenti, Facoltà di Agraria, Università degli Studi di Napoli Federico II, Portici (NA), Italy

  ⨯
• Gianfranco Cosenza,

  Roles Resources

  Affiliation Dipartimento di Scienze Zootecniche ed Ispezione degli Alimenti, Facoltà di Agraria, Università degli Studi di Napoli Federico II, Portici (NA), Italy

  ⨯
• Denise A. A. de Oliveira,

  Roles Resources

  Affiliation Universidade Federal De Minas Gerais (UFMG), Belo Horizonte, Brazil

  ⨯
• Marcela G. Drummond,

  Roles Resources

  Affiliation Universidade Federal De Minas Gerais (UFMG), Belo Horizonte, Brazil

  http://orcid.org/0000-0003-2369-4466

  ⨯
• Eduardo Bastianetto,

  Roles Resources

  Affiliation Universidade Federal De Minas Gerais (UFMG), Belo Horizonte, Brazil

  ⨯
• Alessandro Davassi,

  Roles Methodology, Software, Validation

  Affiliation Affymetrix UK Ltd, High Wycombe, United Kingdom

  http://orcid.org/0000-0001-7233-3240

  ⨯
• Ali Pirani,

  Roles Resources, Software

  Affiliation Affymetrix UK Ltd, High Wycombe, United Kingdom

  http://orcid.org/0000-0003-4543-2424

  ⨯
• Fiona Brew,

  Roles Resources

  Affiliation Affymetrix UK Ltd, High Wycombe, United Kingdom

  ⨯
•  [ ... ],
• John L. Williams

  Roles Conceptualization, Funding acquisition, Project administration, Supervision, Visualization, Writing – original draft, Writing – review & editing

  Affiliation Davies Research Centre, School of Animal and Veterinary Sciences, University of Adelaide, Roseworthy, SA, Australia

  http://orcid.org/0000-0001-5188-7957

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