Comparison of alternative approaches for analysing multi-level RNA-seq data

Irina Mohorianu; Amanda Bretman; Damian T. Smith; Emily K. Fowler; Tamas Dalmay; Tracey Chapman

doi:10.1371/journal.pone.0182694

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Open Access

Peer-reviewed

Research Article

Comparison of alternative approaches for analysing multi-level RNA-seq data

Irina Mohorianu,

Roles Conceptualization, Data curation, Formal analysis, Funding acquisition, Investigation, Methodology, Software, Validation, Visualization, Writing – original draft, Writing – review & editing

Affiliations School of Biological Sciences, University of East Anglia, Norwich Research Park, Norwich, United Kingdom, School of Computing Sciences, University of East Anglia, Norwich Research Park, Norwich, United Kingdom
⨯
Amanda Bretman,

Roles Funding acquisition, Writing – original draft, Writing – review & editing

Affiliations School of Biological Sciences, University of East Anglia, Norwich Research Park, Norwich, United Kingdom, School of Biology, University of Leeds, Leeds, LS2 9JT, United Kingdom
⨯
Damian T. Smith,

Roles Data curation, Investigation, Writing – review & editing

Affiliation School of Biological Sciences, University of East Anglia, Norwich Research Park, Norwich, United Kingdom
⨯
Emily K. Fowler,

Roles Data curation, Investigation, Writing – review & editing

Affiliation School of Biological Sciences, University of East Anglia, Norwich Research Park, Norwich, United Kingdom
⨯
Tamas Dalmay,

Roles Funding acquisition, Project administration, Supervision, Writing – review & editing

Affiliation School of Biological Sciences, University of East Anglia, Norwich Research Park, Norwich, United Kingdom
⨯
Tracey Chapman

Roles Conceptualization, Data curation, Formal analysis, Funding acquisition, Investigation, Methodology, Project administration, Resources, Supervision, Validation, Visualization, Writing – original draft, Writing – review & editing

* E-mail: tracey.chapman@uea.ac.uk

Affiliation School of Biological Sciences, University of East Anglia, Norwich Research Park, Norwich, United Kingdom

http://orcid.org/0000-0002-2401-8120

⨯

Comparison of alternative approaches for analysing multi-level RNA-seq data

Irina Mohorianu,
Amanda Bretman,
Damian T. Smith,
Emily K. Fowler,
Tamas Dalmay,
Tracey Chapman

Published: August 8, 2017
https://doi.org/10.1371/journal.pone.0182694

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Gene expression
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Drosophila melanogaster
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RNA sequencing
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Nucleotide sequencing
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Genome sequencing
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