Multi-scale encoding of amino acid sequences for predicting protein interactions using gradient boosting decision tree

Open Access

Peer-reviewed

Research Article

Chang Zhou,

Affiliations School of Computer Science and Technology, Tianjin University, Tianjin, China, 300072, Tianjin Key Laboratory of Cognitive Computing and Application, Tianjin, China, 300072
⨯
Hua Yu,

Affiliations School of Computer Science and Technology, Tianjin University, Tianjin, China, 300072, Tianjin Key Laboratory of Cognitive Computing and Application, Tianjin, China, 300072
⨯
Yijie Ding,

Affiliations School of Computer Science and Technology, Tianjin University, Tianjin, China, 300072, Tianjin Key Laboratory of Cognitive Computing and Application, Tianjin, China, 300072
⨯
Fei Guo,

Affiliations School of Computer Science and Technology, Tianjin University, Tianjin, China, 300072, Tianjin Key Laboratory of Cognitive Computing and Application, Tianjin, China, 300072
⨯
Xiu-Jun Gong

* E-mail: gongxj@tju.edu.cn

Affiliations School of Computer Science and Technology, Tianjin University, Tianjin, China, 300072, Tianjin Key Laboratory of Cognitive Computing and Application, Tianjin, China, 300072
⨯

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Decision trees
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Protein sequencing
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Protein interactions
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Protein extraction
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Boosting algorithms
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Decision tree learning
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Machine learning
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Covariance
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