Abundance profiling of specific gene groups using precomputed gut metagenomes yields novel biological hypotheses

Konstantin Yarygin; Alexander Tyakht; Andrey Larin; Elena Kostryukova; Sergei Kolchenko; Vilgelm Bitner; Dmitry Alexeev

doi:10.1371/journal.pone.0176154

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Peer-reviewed

Research Article

Abundance profiling of specific gene groups using precomputed gut metagenomes yields novel biological hypotheses

Konstantin Yarygin ,

* E-mail: yarygin@phystech.edu

Affiliations Federal Research and Clinical Centre of Physical-Chemical Medicine (FRCC CPM), Malaya Pirogovskaya 1a, Moscow 119435, Russia, Moscow Institute of Physics and Technology, Institutsky lane 9, Dolgoprudny, Moscow Region, 141700, Russia
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Alexander Tyakht,

Affiliations Federal Research and Clinical Centre of Physical-Chemical Medicine (FRCC CPM), Malaya Pirogovskaya 1a, Moscow 119435, Russia, Moscow Institute of Physics and Technology, Institutsky lane 9, Dolgoprudny, Moscow Region, 141700, Russia
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Andrey Larin,

Affiliation Federal Research and Clinical Centre of Physical-Chemical Medicine (FRCC CPM), Malaya Pirogovskaya 1a, Moscow 119435, Russia
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Elena Kostryukova,

Affiliations Federal Research and Clinical Centre of Physical-Chemical Medicine (FRCC CPM), Malaya Pirogovskaya 1a, Moscow 119435, Russia, Moscow Institute of Physics and Technology, Institutsky lane 9, Dolgoprudny, Moscow Region, 141700, Russia
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Sergei Kolchenko,

Affiliations Moscow Institute of Physics and Technology, Institutsky lane 9, Dolgoprudny, Moscow Region, 141700, Russia, HPC HUB LLC, Prospect Mira 112, Bld.12, Moscow 129626, Russia
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Vilgelm Bitner,

Affiliations Moscow Institute of Physics and Technology, Institutsky lane 9, Dolgoprudny, Moscow Region, 141700, Russia, HPC HUB LLC, Prospect Mira 112, Bld.12, Moscow 129626, Russia
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Dmitry Alexeev

Affiliations Federal Research and Clinical Centre of Physical-Chemical Medicine (FRCC CPM), Malaya Pirogovskaya 1a, Moscow 119435, Russia, Moscow Institute of Physics and Technology, Institutsky lane 9, Dolgoprudny, Moscow Region, 141700, Russia
⨯

Abundance profiling of specific gene groups using precomputed gut metagenomes yields novel biological hypotheses

Konstantin Yarygin,
Alexander Tyakht,
Andrey Larin,
Elena Kostryukova,
Sergei Kolchenko,
Vilgelm Bitner,
Dmitry Alexeev

Published: April 27, 2017
https://doi.org/10.1371/journal.pone.0176154

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Metagenomics
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Bacteriophages
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Gut bacteria
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Gene mapping
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Biosynthesis
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Antibiotic resistance
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Sequence alignment
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