Accurate Classification of RNA Structures Using Topological Fingerprints

Open Access

Peer-reviewed

Research Article

Jiajie Huang,

Affiliations Department of Biological Sciences, Purdue University, West Lafayette, Indiana, United States of America, Life Sciences Solutions Group, Thermo Fisher Scientific, South San Francisco, California, United States of America
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Kejie Li,

Affiliations Department of Biological Sciences, Purdue University, West Lafayette, Indiana, United States of America, Computational Biology Department, Biogen Idec, Cambridge, Massachusetts, United States of America
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Michael Gribskov

* E-mail: gribskov@purdue.edu

Affiliations Department of Biological Sciences, Purdue University, West Lafayette, Indiana, United States of America, Department of Computer Science, Purdue University, West Lafayette, Indiana, United States of America
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RNA structure
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Pseudoknots
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RNA structure prediction
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Topology
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Ribosomal RNA
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Phylogenetic analysis
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RNA sequences
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Sequence motif analysis
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