Identification of Position-Specific Correlations between DNA-Binding Domains and Their Binding Sites. Application to the MerR Family of Transcription Factors

Open Access

Peer-reviewed

Research Article

Yuriy D. Korostelev ,

Contributed equally to this work with: Yuriy D. Korostelev, Ilya A. Zharov

Affiliations A.A. Kharkevich Institute for Information Transmission Problems, Russian Academy of Sciences, 19-1 Bolshoy Karetny pereulok, Moscow, Russia, 127994, Department of Bioengineering and Bioinformatics, Moscow State University, 1-73 Vorobievy Gory, Moscow, Russia, 119991
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Ilya A. Zharov ,

Contributed equally to this work with: Yuriy D. Korostelev, Ilya A. Zharov

Affiliation A.A. Kharkevich Institute for Information Transmission Problems, Russian Academy of Sciences, 19-1 Bolshoy Karetny pereulok, Moscow, Russia, 127994
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Andrey A. Mironov,

Affiliations A.A. Kharkevich Institute for Information Transmission Problems, Russian Academy of Sciences, 19-1 Bolshoy Karetny pereulok, Moscow, Russia, 127994, Department of Bioengineering and Bioinformatics, Moscow State University, 1-73 Vorobievy Gory, Moscow, Russia, 119991
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Alexandra B. Rakhmaininova,

Affiliation A.A. Kharkevich Institute for Information Transmission Problems, Russian Academy of Sciences, 19-1 Bolshoy Karetny pereulok, Moscow, Russia, 127994
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Mikhail S. Gelfand

* E-mail: gelfand@iitp.ru

Affiliations A.A. Kharkevich Institute for Information Transmission Problems, Russian Academy of Sciences, 19-1 Bolshoy Karetny pereulok, Moscow, Russia, 127994, Department of Bioengineering and Bioinformatics, Moscow State University, 1-73 Vorobievy Gory, Moscow, Russia, 119991
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Transcription factors
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DNA-binding proteins
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Crystal structure
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Phylogenetic analysis
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Nucleotides
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Protein structure comparison
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Protein structure
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Sequence alignment
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