aPPRove: An HMM-Based Method for Accurate Prediction of RNA-Pentatricopeptide Repeat Protein Binding Events

Open Access

Peer-reviewed

Research Article

Thomas Harrison ,

* E-mail: thomas.harrison@cs.colostate.edu

Affiliation Department of Computer Science, Colorado State University, Fort Collins, CO, 80523, United States of America
⨯
Jaime Ruiz,

Affiliation Department of Computer and Information Science and Engineering, University of Florida, Gainesville, FL, 32611, United States of America
⨯
Daniel B. Sloan,

Affiliation Department of Biology, Colorado State University, Fort Collins, CO, 80523, United States of America
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Asa Ben-Hur,

Affiliation Department of Computer Science, Colorado State University, Fort Collins, CO, 80523, United States of America
⨯
Christina Boucher

Affiliation Department of Computer and Information Science and Engineering, University of Florida, Gainesville, FL, 32611, United States of America
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Sequence alignment
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RNA-binding proteins
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RNA alignment
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Protein structure comparison
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Protein domains
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Protein sequencing
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Arabidopsis thaliana
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Protein interactions
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