A Novel Analytical Strategy to Identify Fusion Transcripts between Repetitive Elements and Protein Coding-Exons Using RNA-Seq

• Tianyuan Wang ,

  Contributed equally to this work with: Tianyuan Wang, Janine H. Santos

  Affiliation National Institute of Environmental Health Sciences (NIEHS), 111 TW Alexander Drive, Building 101, Research Triangle Park, NC, 27709, United States of America

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• Janine H. Santos ,

  Contributed equally to this work with: Tianyuan Wang, Janine H. Santos

  Affiliation National Institute of Environmental Health Sciences (NIEHS), 111 TW Alexander Drive, Building 101, Research Triangle Park, NC, 27709, United States of America

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• Jian Feng,

  Affiliation Fishberg Department of Neuroscience and Friedman Brain Institute, Icahn School of Medicine at Mount Sinai, One Gustave L. Levy Place, Box 1065, New York, NY, 10029, United States of America

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• David C. Fargo,

  Affiliation National Institute of Environmental Health Sciences (NIEHS), 111 TW Alexander Drive, Building 101, Research Triangle Park, NC, 27709, United States of America

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• Li Shen,

  Affiliation Fishberg Department of Neuroscience and Friedman Brain Institute, Icahn School of Medicine at Mount Sinai, One Gustave L. Levy Place, Box 1065, New York, NY, 10029, United States of America

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• Gonzalo Riadi,

  Affiliation Centro de Bioinformática y Simulación Molecular (CBSM), Departamiento de Bioinformática, Facultad de Ingeniería, Universidad de Talca, Av. 2 Norte, 685, Talca, 3465548, Chile

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• Elizabeth Keeley,

  Affiliation Fishberg Department of Neuroscience and Friedman Brain Institute, Icahn School of Medicine at Mount Sinai, One Gustave L. Levy Place, Box 1065, New York, NY, 10029, United States of America

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• Zachary S. Rosh,

  Affiliation Fishberg Department of Neuroscience and Friedman Brain Institute, Icahn School of Medicine at Mount Sinai, One Gustave L. Levy Place, Box 1065, New York, NY, 10029, United States of America

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• Eric J. Nestler ,

  * E-mail: rick.woychik@nih.gov (RPW); eric.nestler@mssm.edu (EJN)

  Affiliation Fishberg Department of Neuroscience and Friedman Brain Institute, Icahn School of Medicine at Mount Sinai, One Gustave L. Levy Place, Box 1065, New York, NY, 10029, United States of America

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• Richard P. Woychik

  * E-mail: rick.woychik@nih.gov (RPW); eric.nestler@mssm.edu (EJN)

  Affiliation National Institute of Environmental Health Sciences (NIEHS), 111 TW Alexander Drive, Building 101, Research Triangle Park, NC, 27709, United States of America

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