A Method for Checking Genomic Integrity in Cultured Cell Lines from SNP Genotyping Data

Open Access

Peer-reviewed

Research Article

Petr Danecek ,

* E-mail: pd3@sanger.ac.uk (PD); rd@sanger.ac.uk (RD)

Affiliation Wellcome Trust Sanger Institute, Wellcome Trust Genome Campus, Cambridge, CB10 1SA, United Kingdom

http://orcid.org/0000-0002-4159-1666

⨯
Shane A. McCarthy,

Affiliation Wellcome Trust Sanger Institute, Wellcome Trust Genome Campus, Cambridge, CB10 1SA, United Kingdom
⨯
HipSci Consortium ,

¶A full list of participants and their affiliations is available in S1 Text.
⨯
Richard Durbin

* E-mail: pd3@sanger.ac.uk (PD); rd@sanger.ac.uk (RD)

Affiliation Wellcome Trust Sanger Institute, Wellcome Trust Genome Campus, Cambridge, CB10 1SA, United Kingdom
⨯

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Copy number variation
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Hidden Markov models
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Genotyping
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Heterozygosity
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Variant genotypes
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Genomics
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Simulation and modeling
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Single nucleotide polymorphisms
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