A Dynamic 3D Graphical Representation for RNA Structure Analysis and Its Application in Non-Coding RNA Classification

Yi Zhang; Haiyun Huang; Xiaoqing Dong; Yiliang Fang; Kejing Wang; Lijuan Zhu; Ke Wang; Tao Huang; Jialiang Yang

doi:10.1371/journal.pone.0152238

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Open Access

Peer-reviewed

Research Article

A Dynamic 3D Graphical Representation for RNA Structure Analysis and Its Application in Non-Coding RNA Classification

Yi Zhang ,

Contributed equally to this work with: Yi Zhang, Haiyun Huang

* E-mail: Jialiang.yang@mssm.edu (JY); zhaqi1972@163.com (YZ); tohuangtao@126.com (TH)

Affiliations Department of Mathematics, Hebei University of Science and Technology, Shijiazhuang, Hebei 050018, People's Republic of China, Hebei Laboratory of Pharmaceutic Molecular Chemistry, Shijiazhuang, Hebei 050018, People's Republic of China
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Haiyun Huang ,

Contributed equally to this work with: Yi Zhang, Haiyun Huang

Affiliation Department of Information Retrieval of Library, Hebei University of Science and Technology, Shijiazhuang, Hebei 050018, People's Republic of China
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Xiaoqing Dong,

Affiliation Department of Mathematics, Hebei University of Science and Technology, Shijiazhuang, Hebei 050018, People's Republic of China
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Yiliang Fang,

Affiliation International Travel Healthcare Center, Fuzhou, Fujian 350001, People's Republic of China
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Kejing Wang,

Affiliation Department of Mathematics, Hebei University of Science and Technology, Shijiazhuang, Hebei 050018, People's Republic of China
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Lijuan Zhu,

Affiliation Department of Mathematics, Hebei University of Science and Technology, Shijiazhuang, Hebei 050018, People's Republic of China
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Ke Wang,

Affiliation Department of Mathematics, Hebei University of Science and Technology, Shijiazhuang, Hebei 050018, People's Republic of China
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Tao Huang ,

* E-mail: Jialiang.yang@mssm.edu (JY); zhaqi1972@163.com (YZ); tohuangtao@126.com (TH)

Affiliation Institute of Health Sciences, Shanghai Institutes for Biological Sciences, Chinese Academy of Sciences, Shanghai 200031, People's Republic of China
⨯
Jialiang Yang

* E-mail: Jialiang.yang@mssm.edu (JY); zhaqi1972@163.com (YZ); tohuangtao@126.com (TH)

Affiliations Department of Mathematics, Hebei University of Science and Technology, Shijiazhuang, Hebei 050018, People's Republic of China, Department of Genetics and Genomic Sciences, Icahn School of Medicine at Mount Sinai, New York, NY 10029, United States of America

http://orcid.org/0000-0003-4689-8672

⨯

A Dynamic 3D Graphical Representation for RNA Structure Analysis and Its Application in Non-Coding RNA Classification

Yi Zhang,
Haiyun Huang,
Xiaoqing Dong,
Yiliang Fang,
Kejing Wang,
Lijuan Zhu,
Ke Wang,
Tao Huang,
Jialiang Yang

Published: May 23, 2016
https://doi.org/10.1371/journal.pone.0152238

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RNA structure
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Phylogenetic analysis
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Non-coding RNA
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Viral structure
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Ribonucleases
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