Parallel and Scalable Short-Read Alignment on Multi-Core Clusters Using UPC++

Open Access

Peer-reviewed

Research Article

Jorge González-Domínguez,

Affiliation Parallel and Distributed Architectures Group, Johannes Gutenberg University Mainz, Mainz, Germany
⨯
Yongchao Liu,

Affiliation School of Computational Science & Engineering, Georgia Institute of Technology, Atlanta, Georgia, United States of America
⨯
Bertil Schmidt

* E-mail: bertil.schmidt@uni-mainz.de

Affiliation Parallel and Distributed Architectures Group, Johannes Gutenberg University Mainz, Mainz, Germany
⨯

Reader Comments (0)

Sequence alignment
Is the Subject Area "Sequence alignment" applicable to this article?

Thanks for your feedback.
Genomics
Is the Subject Area "Genomics" applicable to this article?

Thanks for your feedback.
Next-generation sequencing
Is the Subject Area "Next-generation sequencing" applicable to this article?

Thanks for your feedback.
Source code
Is the Subject Area "Source code" applicable to this article?

Thanks for your feedback.
Heuristic alignment procedure
Is the Subject Area "Heuristic alignment procedure" applicable to this article?

Thanks for your feedback.
Language
Is the Subject Area "Language" applicable to this article?

Thanks for your feedback.
Genome analysis
Is the Subject Area "Genome analysis" applicable to this article?

Thanks for your feedback.
Programming languages
Is the Subject Area "Programming languages" applicable to this article?

Thanks for your feedback.