Transcriptator: An Automated Computational Pipeline to Annotate Assembled Reads and Identify Non Coding RNA

Open Access

Peer-reviewed

Research Article

Kumar Parijat Tripathi ,

Contributed equally to this work with: Kumar Parijat Tripathi, Daniela Evangelista

* E-mail: kumpar@na.icar.cnr.it

Affiliation Laboratory for Genomics, Transcriptomics and Proteomics (LAB-GTP), High Performance Computing and Networking Institute (ICAR), National Research Council of Italy (CNR), Via Pietro Castellino, 111, Napoli, Italy
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Daniela Evangelista ,

Contributed equally to this work with: Kumar Parijat Tripathi, Daniela Evangelista

Affiliation Laboratory for Genomics, Transcriptomics and Proteomics (LAB-GTP), High Performance Computing and Networking Institute (ICAR), National Research Council of Italy (CNR), Via Pietro Castellino, 111, Napoli, Italy
⨯
Antonio Zuccaro,

Affiliation Laboratory for Genomics, Transcriptomics and Proteomics (LAB-GTP), High Performance Computing and Networking Institute (ICAR), National Research Council of Italy (CNR), Via Pietro Castellino, 111, Napoli, Italy
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Mario Rosario Guarracino

Affiliation Laboratory for Genomics, Transcriptomics and Proteomics (LAB-GTP), High Performance Computing and Networking Institute (ICAR), National Research Council of Italy (CNR), Via Pietro Castellino, 111, Napoli, Italy
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Hydra
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Gene ontologies
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Genome annotation
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Non-coding RNA
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Protein domains
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Computational pipelines
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Cadmium
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Transcriptome analysis
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