CoGA: An R Package to Identify Differentially Co-Expressed Gene Sets by Analyzing the Graph Spectra

Open Access

Peer-reviewed

Research Article

Suzana de Siqueira Santos,

Affiliation Department of Computer Science, Institute of Mathematics and Statistics, University of São Paulo, São Paulo, Brazil
⨯
Thais Fernanda de Almeida Galatro,

Affiliation Department of Neurology, School of Medicine, University of São Paulo, São Paulo, Brazil
⨯
Rodrigo Akira Watanabe,

Affiliation Department of Neurology, School of Medicine, University of São Paulo, São Paulo, Brazil
⨯
Sueli Mieko Oba-Shinjo,

Affiliation Department of Neurology, School of Medicine, University of São Paulo, São Paulo, Brazil
⨯
Suely Kazue Nagahashi Marie,

Affiliation Department of Neurology, School of Medicine, University of São Paulo, São Paulo, Brazil
⨯
André Fujita

* E-mail: fujita@ime.usp.br

Affiliation Department of Computer Science, Institute of Mathematics and Statistics, University of São Paulo, São Paulo, Brazil
⨯

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Genetic networks
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Gene expression
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Centrality
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Network analysis
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Microarrays
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Astrocytoma
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Clustering coefficients
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Entropy
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