De novo Transcriptome Assembly of Common Wild Rice (Oryza rufipogon Griff.) and Discovery of Drought-Response Genes in Root Tissue Based on Transcriptomic Data

Xin-jie Tian; Yan Long; Jiao Wang; Jing-wen Zhang; Yan-yan Wang; Wei-min Li; Yu-fa Peng; Qian-hua Yuan; Xin-wu Pei

doi:10.1371/journal.pone.0131455

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Open Access

Peer-reviewed

Research Article

De novo Transcriptome Assembly of Common Wild Rice (Oryza rufipogon Griff.) and Discovery of Drought-Response Genes in Root Tissue Based on Transcriptomic Data

Xin-jie Tian ,

Contributed equally to this work with: Xin-jie Tian, Yan Long, Jiao Wang

Affiliation College of Agriculture, Hainan Key Laboratory for Sustainable Utilization of Tropical Bioresources, Hainan University, Haikou, 570228, China
⨯
Yan Long ,

Contributed equally to this work with: Xin-jie Tian, Yan Long, Jiao Wang

Affiliation Institute of Biotechnology, Chinese Academy of Agricultural Sciences, Beijing, 100081, China
⨯
Jiao Wang ,

Contributed equally to this work with: Xin-jie Tian, Yan Long, Jiao Wang

Affiliation Institute of Biotechnology, Chinese Academy of Agricultural Sciences, Beijing, 100081, China
⨯
Jing-wen Zhang,

Affiliation Institute of Biotechnology, Chinese Academy of Agricultural Sciences, Beijing, 100081, China
⨯
Yan-yan Wang,

Affiliation Institute of Biotechnology, Chinese Academy of Agricultural Sciences, Beijing, 100081, China
⨯
Wei-min Li,

Affiliation Institute of Biotechnology, Chinese Academy of Agricultural Sciences, Beijing, 100081, China
⨯
Yu-fa Peng,

Affiliation Institute of Plant Protection, Chinese Academy of Agricultural Sciences, Beijing, 100094, China
⨯
Qian-hua Yuan ,

* E-mail: peixinwu@caas.cn (X-wP); qhyuan@163.com (Q-hY)

Affiliation College of Agriculture, Hainan Key Laboratory for Sustainable Utilization of Tropical Bioresources, Hainan University, Haikou, 570228, China
⨯
Xin-wu Pei

* E-mail: peixinwu@caas.cn (X-wP); qhyuan@163.com (Q-hY)

Affiliation Institute of Biotechnology, Chinese Academy of Agricultural Sciences, Beijing, 100081, China
⨯

De novo Transcriptome Assembly of Common Wild Rice (Oryza rufipogon Griff.) and Discovery of Drought-Response Genes in Root Tissue Based on Transcriptomic Data

Xin-jie Tian,
Yan Long,
Jiao Wang,
Jing-wen Zhang,
Yan-yan Wang,
Wei-min Li,
Yu-fa Peng,
Qian-hua Yuan,
Xin-wu Pei

Published: July 2, 2015
https://doi.org/10.1371/journal.pone.0131455

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Gene expression
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Transcriptome analysis
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