Free Energy Landscape and Multiple Folding Pathways of an H-Type RNA Pseudoknot

Open Access

Peer-reviewed

Research Article

Yunqiang Bian,

Affiliations Collaborative Innovation Center of Advanced Microstructures and Department of Physics, Nanjing University, Nanjing 210093, China, Shandong Provincial Key Laboratory of Functional Macromolecular Biophysics, Institute of Biophysics, Dezhou University, Dezhou 253023, China
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Jian Zhang ,

* E-mail: jzhang@nju.edu.cn (JZ); wangwei@nju.edu.cn (WW)

Affiliation Collaborative Innovation Center of Advanced Microstructures and Department of Physics, Nanjing University, Nanjing 210093, China
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Jun Wang,

Affiliation Collaborative Innovation Center of Advanced Microstructures and Department of Physics, Nanjing University, Nanjing 210093, China
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Jihua Wang,

Affiliation Shandong Provincial Key Laboratory of Functional Macromolecular Biophysics, Institute of Biophysics, Dezhou University, Dezhou 253023, China
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Wei Wang

* E-mail: jzhang@nju.edu.cn (JZ); wangwei@nju.edu.cn (WW)

Affiliation Collaborative Innovation Center of Advanced Microstructures and Department of Physics, Nanjing University, Nanjing 210093, China
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RNA structure
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Pseudoknots
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RNA folding
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Biochemical simulations
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Protein folding
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Ions
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Cations
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Free energy
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