Large-Scale SNP Discovery and Genotyping for Constructing a High-Density Genetic Map of Tea Plant Using Specific-Locus Amplified Fragment Sequencing (SLAF-seq)

Jian-Qiang Ma; Long Huang; Chun-Lei Ma; Ji-Qiang Jin; Chun-Fang Li; Rong-Kai Wang; Hong-Kun Zheng; Ming-Zhe Yao; Liang Chen

doi:10.1371/journal.pone.0128798

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Open Access

Peer-reviewed

Research Article

Large-Scale SNP Discovery and Genotyping for Constructing a High-Density Genetic Map of Tea Plant Using Specific-Locus Amplified Fragment Sequencing (SLAF-seq)

Jian-Qiang Ma ,

Contributed equally to this work with: Jian-Qiang Ma, Long Huang

Affiliations National Center for Tea Improvement, Tea Research Institute, Chinese Academy of Agricultural Sciences, Hangzhou, Zhejiang, China, Key Laboratory of Tea Biology and Resources Utilization, Ministry of Agriculture, Hangzhou, Zhejiang, China
⨯
Long Huang ,

Contributed equally to this work with: Jian-Qiang Ma, Long Huang

Affiliation Biomarker Technologies Co Ltd, Beijing, China
⨯
Chun-Lei Ma,

Affiliations National Center for Tea Improvement, Tea Research Institute, Chinese Academy of Agricultural Sciences, Hangzhou, Zhejiang, China, Key Laboratory of Tea Biology and Resources Utilization, Ministry of Agriculture, Hangzhou, Zhejiang, China
⨯
Ji-Qiang Jin,

Affiliations National Center for Tea Improvement, Tea Research Institute, Chinese Academy of Agricultural Sciences, Hangzhou, Zhejiang, China, Key Laboratory of Tea Biology and Resources Utilization, Ministry of Agriculture, Hangzhou, Zhejiang, China
⨯
Chun-Fang Li,

Affiliations National Center for Tea Improvement, Tea Research Institute, Chinese Academy of Agricultural Sciences, Hangzhou, Zhejiang, China, Key Laboratory of Tea Biology and Resources Utilization, Ministry of Agriculture, Hangzhou, Zhejiang, China
⨯
Rong-Kai Wang,

Affiliation Biomarker Technologies Co Ltd, Beijing, China
⨯
Hong-Kun Zheng,

Affiliation Biomarker Technologies Co Ltd, Beijing, China
⨯
Ming-Zhe Yao ,

* E-mail: liangchen@tricaas.com (LC); yaomz@tricaas.com (MZY)

Affiliations National Center for Tea Improvement, Tea Research Institute, Chinese Academy of Agricultural Sciences, Hangzhou, Zhejiang, China, Key Laboratory of Tea Biology and Resources Utilization, Ministry of Agriculture, Hangzhou, Zhejiang, China
⨯
Liang Chen

* E-mail: liangchen@tricaas.com (LC); yaomz@tricaas.com (MZY)

Affiliations National Center for Tea Improvement, Tea Research Institute, Chinese Academy of Agricultural Sciences, Hangzhou, Zhejiang, China, Key Laboratory of Tea Biology and Resources Utilization, Ministry of Agriculture, Hangzhou, Zhejiang, China
⨯

Large-Scale SNP Discovery and Genotyping for Constructing a High-Density Genetic Map of Tea Plant Using Specific-Locus Amplified Fragment Sequencing (SLAF-seq)

Jian-Qiang Ma,
Long Huang,
Chun-Lei Ma,
Ji-Qiang Jin,
Chun-Fang Li,
Rong-Kai Wang,
Hong-Kun Zheng,
Ming-Zhe Yao,
Liang Chen

Published: June 2, 2015
https://doi.org/10.1371/journal.pone.0128798

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Gene mapping
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Single nucleotide polymorphisms
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Tea
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Genotyping
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Genetic loci
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Linkage mapping
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Plant genetics
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DNA recombination
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