Nuclear Species-Diagnostic SNP Markers Mined from 454 Amplicon Sequencing Reveal Admixture Genomic Structure of Modern Citrus Varieties

Franck Curk; Gema Ancillo; Frédérique Ollitrault; Xavier Perrier; Jean-Pierre Jacquemoud-Collet; Andres Garcia-Lor; Luis Navarro; Patrick Ollitrault

doi:10.1371/journal.pone.0125628

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Peer-reviewed

Research Article

Nuclear Species-Diagnostic SNP Markers Mined from 454 Amplicon Sequencing Reveal Admixture Genomic Structure of Modern Citrus Varieties

Franck Curk,

Affiliations Unité Mixte de Recherche Amélioration Génétique et Adaptation des Plantes (UMR Agap), Institut National de la Recherche Agronomique (Inra), Centre Inra de Corse, F-20230, San Giuliano, Corsica, France, Centro de Protección Vegetal y Biotecnología, Instituto Valenciano de Investigaciones Agrarias (Ivia), 46113, Moncada, Valencia, Spain
⨯
Gema Ancillo,

Affiliation Centro de Protección Vegetal y Biotecnología, Instituto Valenciano de Investigaciones Agrarias (Ivia), 46113, Moncada, Valencia, Spain
⨯
Frédérique Ollitrault,

Affiliation Centro de Protección Vegetal y Biotecnología, Instituto Valenciano de Investigaciones Agrarias (Ivia), 46113, Moncada, Valencia, Spain
⨯
Xavier Perrier,

Affiliation Unité Mixte de Recherche Amélioration Génétique et Adaptation des Plantes (UMR Agap), Centre de coopération Internationale en Recherche Agronomique pour le Développement (Cirad), TA A-108/02, 34398, Montpellier, Cedex 5, France
⨯
Jean-Pierre Jacquemoud-Collet,

Affiliation Unité Mixte de Recherche Amélioration Génétique et Adaptation des Plantes (UMR Agap), Centre de coopération Internationale en Recherche Agronomique pour le Développement (Cirad), TA A-108/02, 34398, Montpellier, Cedex 5, France
⨯
Andres Garcia-Lor,

Affiliation Centro de Protección Vegetal y Biotecnología, Instituto Valenciano de Investigaciones Agrarias (Ivia), 46113, Moncada, Valencia, Spain
⨯
Luis Navarro ,

* E-mail: lnavarro@ivia.es (LN); ollitrault@cirad.fr (PO)

Affiliation Centro de Protección Vegetal y Biotecnología, Instituto Valenciano de Investigaciones Agrarias (Ivia), 46113, Moncada, Valencia, Spain
⨯
Patrick Ollitrault

* E-mail: lnavarro@ivia.es (LN); ollitrault@cirad.fr (PO)

Affiliations Centro de Protección Vegetal y Biotecnología, Instituto Valenciano de Investigaciones Agrarias (Ivia), 46113, Moncada, Valencia, Spain, Unité Mixte de Recherche Amélioration Génétique et Adaptation des Plantes (UMR Agap), Centre de coopération Internationale en Recherche Agronomique pour le Développement (Cirad), Station de Roujol, 97170, Petit-Bourg, Guadeloupe, France
⨯

Nuclear Species-Diagnostic SNP Markers Mined from 454 Amplicon Sequencing Reveal Admixture Genomic Structure of Modern Citrus Varieties

Franck Curk,
Gema Ancillo,
Frédérique Ollitrault,
Xavier Perrier,
Jean-Pierre Jacquemoud-Collet,
Andres Garcia-Lor,
Luis Navarro,
Patrick Ollitrault

Published: May 14, 2015
https://doi.org/10.1371/journal.pone.0125628

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Single nucleotide polymorphisms
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Heterozygosity
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Citrus
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Genomics
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