Large-Scale SNP Discovery through RNA Sequencing and SNP Genotyping by Targeted Enrichment Sequencing in Cassava (Manihot esculenta Crantz)

Wirulda Pootakham; Jeremy R. Shearman; Panthita Ruang-areerate; Chutima Sonthirod; Duangjai Sangsrakru; Nukoon Jomchai; Thippawan Yoocha; Kanokporn Triwitayakorn; Somvong Tragoonrung; Sithichoke Tangphatsornruang

doi:10.1371/journal.pone.0116028

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Open Access

Peer-reviewed

Research Article

Large-Scale SNP Discovery through RNA Sequencing and SNP Genotyping by Targeted Enrichment Sequencing in Cassava (Manihot esculenta Crantz)

Wirulda Pootakham,

Affiliation National Center for Genetic Engineering and Biotechnology (BIOTEC), National Science and Technology Development Agency (NSTDA), 113 Thailand Science Park, Pathum Thani, Thailand
⨯
Jeremy R. Shearman,

Affiliation National Center for Genetic Engineering and Biotechnology (BIOTEC), National Science and Technology Development Agency (NSTDA), 113 Thailand Science Park, Pathum Thani, Thailand
⨯
Panthita Ruang-areerate,

Affiliation National Center for Genetic Engineering and Biotechnology (BIOTEC), National Science and Technology Development Agency (NSTDA), 113 Thailand Science Park, Pathum Thani, Thailand
⨯
Chutima Sonthirod,

Affiliation National Center for Genetic Engineering and Biotechnology (BIOTEC), National Science and Technology Development Agency (NSTDA), 113 Thailand Science Park, Pathum Thani, Thailand
⨯
Duangjai Sangsrakru,

Affiliation National Center for Genetic Engineering and Biotechnology (BIOTEC), National Science and Technology Development Agency (NSTDA), 113 Thailand Science Park, Pathum Thani, Thailand
⨯
Nukoon Jomchai,

Affiliation National Center for Genetic Engineering and Biotechnology (BIOTEC), National Science and Technology Development Agency (NSTDA), 113 Thailand Science Park, Pathum Thani, Thailand
⨯
Thippawan Yoocha,

Affiliation National Center for Genetic Engineering and Biotechnology (BIOTEC), National Science and Technology Development Agency (NSTDA), 113 Thailand Science Park, Pathum Thani, Thailand
⨯
Kanokporn Triwitayakorn,

Affiliation Institute of Molecular Biosciences, Mahidol University, Nakhon Pathom, Thailand
⨯
Somvong Tragoonrung,

Affiliation National Center for Genetic Engineering and Biotechnology (BIOTEC), National Science and Technology Development Agency (NSTDA), 113 Thailand Science Park, Pathum Thani, Thailand
⨯
Sithichoke Tangphatsornruang

* E-mail: sithichoke.tan@biotec.or.th

Affiliation National Center for Genetic Engineering and Biotechnology (BIOTEC), National Science and Technology Development Agency (NSTDA), 113 Thailand Science Park, Pathum Thani, Thailand
⨯

Large-Scale SNP Discovery through RNA Sequencing and SNP Genotyping by Targeted Enrichment Sequencing in Cassava (Manihot esculenta Crantz)

Wirulda Pootakham,
Jeremy R. Shearman,
Panthita Ruang-areerate,
Chutima Sonthirod,
Duangjai Sangsrakru,
Nukoon Jomchai,
Thippawan Yoocha,
Kanokporn Triwitayakorn,
Somvong Tragoonrung,
Sithichoke Tangphatsornruang

Published: December 31, 2014
https://doi.org/10.1371/journal.pone.0116028

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Single nucleotide polymorphisms
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Cassava
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Starches
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Gene mapping
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