MacSyFinder: A Program to Mine Genomes for Molecular Systems with an Application to CRISPR-Cas Systems

Open Access

Peer-reviewed

Research Article

Sophie S. Abby ,

* E-mail: sophie.abby@pasteur.fr

Affiliations Microbial Evolutionary Genomics, Institut Pasteur, Paris, France, UMR3525, CNRS, Paris, France
⨯
Bertrand Néron,

Affiliation Centre d’Informatique pour la Biologie, Institut Pasteur, Paris, France
⨯
Hervé Ménager,

Affiliation Centre d’Informatique pour la Biologie, Institut Pasteur, Paris, France
⨯
Marie Touchon,

Affiliations Microbial Evolutionary Genomics, Institut Pasteur, Paris, France, UMR3525, CNRS, Paris, France
⨯
Eduardo P. C. Rocha

Affiliations Microbial Evolutionary Genomics, Institut Pasteur, Paris, France, UMR3525, CNRS, Paris, France
⨯

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Genomics
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Hidden Markov models
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Genetics
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Sequence similarity searching
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CRISPR
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Bacterial genomics
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Macromolecules
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Operons
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