Development and Validation of a 20K Single Nucleotide Polymorphism (SNP) Whole Genome Genotyping Array for Apple (Malus × domestica Borkh)

Luca Bianco; Alessandro Cestaro; Daniel James Sargent; Elisa Banchi; Sophia Derdak; Mario Di Guardo; Silvio Salvi; Johannes Jansen; Roberto Viola; Ivo Gut; Francois Laurens; David Chagné; Riccardo Velasco; Eric van de Weg; Michela Troggio

doi:10.1371/journal.pone.0110377

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Open Access

Peer-reviewed

Research Article

Development and Validation of a 20K Single Nucleotide Polymorphism (SNP) Whole Genome Genotyping Array for Apple (Malus × domestica Borkh)

Luca Bianco,

Affiliation Research and Innovation Centre, Fondazione Edmund Mach, San Michele all’Adige, Trento, Italy
⨯
Alessandro Cestaro,

Affiliation Research and Innovation Centre, Fondazione Edmund Mach, San Michele all’Adige, Trento, Italy
⨯
Daniel James Sargent,

Affiliation Research and Innovation Centre, Fondazione Edmund Mach, San Michele all’Adige, Trento, Italy
⨯
Elisa Banchi,

Affiliation Research and Innovation Centre, Fondazione Edmund Mach, San Michele all’Adige, Trento, Italy
⨯
Sophia Derdak,

Affiliation CNAG – Centro Nacional de Análisis Genómico, Parc Científic de Barcelona, Barcelona, Spain
⨯
Mario Di Guardo,

Affiliations Research and Innovation Centre, Fondazione Edmund Mach, San Michele all’Adige, Trento, Italy, Wageningen UR Plant Breeding, Wageningen University and Research Centre, Wageningen, The Netherlands
⨯
Silvio Salvi,

Affiliation DipSA - University of Bologna, Bologna, Italy
⨯
Johannes Jansen,

Affiliation Biometris, Wageningen University and Research Centre, Wageningen, The Netherlands
⨯
Roberto Viola,

Affiliation Research and Innovation Centre, Fondazione Edmund Mach, San Michele all’Adige, Trento, Italy
⨯
Ivo Gut,

Affiliation CNAG – Centro Nacional de Análisis Genómico, Parc Científic de Barcelona, Barcelona, Spain
⨯
Francois Laurens,

Affiliation INRA, UMR1345 Institut de Recherche en Horticulture and Semences, Beaucouzé, France
⨯
David Chagné,

Affiliation Plant & Food Research, Palmerston North Research Centre, Palmerston North, New Zealand
⨯
Riccardo Velasco,

Affiliation Research and Innovation Centre, Fondazione Edmund Mach, San Michele all’Adige, Trento, Italy
⨯
Eric van de Weg,

Affiliation Wageningen UR Plant Breeding, Wageningen University and Research Centre, Wageningen, The Netherlands
⨯
Michela Troggio

* E-mail: michela.troggio@fmach.it

Affiliation Research and Innovation Centre, Fondazione Edmund Mach, San Michele all’Adige, Trento, Italy
⨯

Development and Validation of a 20K Single Nucleotide Polymorphism (SNP) Whole Genome Genotyping Array for Apple (Malus × domestica Borkh)

Luca Bianco,
Alessandro Cestaro,
Daniel James Sargent,
Elisa Banchi,
Sophia Derdak,
Mario Di Guardo,
Silvio Salvi,
Johannes Jansen,
Roberto Viola,
Ivo Gut

Published: October 10, 2014
https://doi.org/10.1371/journal.pone.0110377

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Single nucleotide polymorphisms
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Genomics
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Apples
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Heterozygosity
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Variant genotypes
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Genotyping
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Gene mapping
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Plant breeding
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