Detection of Transmission Clusters of HIV-1 Subtype C over a 21-Year Period in Cape Town, South Africa

Open Access

Peer-reviewed

Research Article

Eduan Wilkinson,

Affiliations Division of Medical Virology, Department of Pathology, Faculty of Medicine and Health Sciences, Stellenbosch University, Tygerberg, Cape Town, Western Cape Province, South Africa, Africa Centre for Health and Population Studies, University of KwaZulu-Natal, Somkhele, KwaZulu-Natal, South Africa
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Susan Engelbrecht,

Affiliations Division of Medical Virology, Department of Pathology, Faculty of Medicine and Health Sciences, Stellenbosch University, Tygerberg, Cape Town, Western Cape Province, South Africa, National Health Laboratory Services, Tygerberg Hospital, Cape Town, Western Cape Province, South Africa
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Tulio de Oliveira

* E-mail: tuliodna@gmail.com

Affiliations Africa Centre for Health and Population Studies, University of KwaZulu-Natal, Somkhele, KwaZulu-Natal, South Africa, School of Laboratory Medicine and Medical Sciences, University of KwaZulu-Natal, Durban, KwaZulu-Natal, South Africa, Research Department of Infection, University College of London, London, the United Kingdom
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African people
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HIV epidemiology
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Phylogenetic analysis
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HIV-1
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HIV
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Phylogenetics
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South Africa
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Sequence alignment
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