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Open Access

Peer-reviewed

Research Article

RNA-Seq Gene Profiling - A Systematic Empirical Comparison

Nuno A. Fonseca ,

* E-mail: nf@ebi.ac.uk (NF); marioni@ebi.ac.uk (JM); brazma@ebi.ac.uk (AB)

Affiliation European Molecular Biology Laboratory, European Bioinformatics Institute (EMBL-EBI), Wellcome Trust Genome Campus, Hinxton, United Kingdom
⨯
John Marioni ,

* E-mail: nf@ebi.ac.uk (NF); marioni@ebi.ac.uk (JM); brazma@ebi.ac.uk (AB)

Affiliation European Molecular Biology Laboratory, European Bioinformatics Institute (EMBL-EBI), Wellcome Trust Genome Campus, Hinxton, United Kingdom
⨯
Alvis Brazma

* E-mail: nf@ebi.ac.uk (NF); marioni@ebi.ac.uk (JM); brazma@ebi.ac.uk (AB)

Affiliation European Molecular Biology Laboratory, European Bioinformatics Institute (EMBL-EBI), Wellcome Trust Genome Campus, Hinxton, United Kingdom
⨯

RNA-Seq Gene Profiling - A Systematic Empirical Comparison

Nuno A. Fonseca,
John Marioni,
Alvis Brazma

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Published: September 30, 2014
https://doi.org/10.1371/journal.pone.0107026
See the preprint

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Gene expression
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Sequence alignment
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Computational pipelines
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Simulation and modeling
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Genomics
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Transcriptome analysis
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Gene sequencing
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RNA sequencing
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