iDNA-Prot|dis: Identifying DNA-Binding Proteins by Incorporating Amino Acid Distance-Pairs and Reduced Alphabet Profile into the General Pseudo Amino Acid Composition

Bin Liu; Jinghao Xu; Xun Lan; Ruifeng Xu; Jiyun Zhou; Xiaolong Wang; Kuo-Chen Chou

doi:10.1371/journal.pone.0106691

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Peer-reviewed

Research Article

iDNA-Prot|dis: Identifying DNA-Binding Proteins by Incorporating Amino Acid Distance-Pairs and Reduced Alphabet Profile into the General Pseudo Amino Acid Composition

Bin Liu ,

* E-mail: bliu@gordonlifescience.org (BL); kcchou@gordonlifescience.org (KCC)

Affiliations School of Computer Science and Technology, Harbin Institute of Technology Shenzhen Graduate School, Shenzhen, Guangdong, China, Key Laboratory of Network Oriented Intelligent Computation, Harbin Institute of Technology Shenzhen Graduate School, Shenzhen, Guangdong, China, Shanghai Key Laboratory of Intelligent Information Processing, Shanghai, China, Gordon Life Science Institute, Belmont, Massachusetts, United States of America
⨯
Jinghao Xu,

Affiliation School of Computer Science and Technology, Harbin Institute of Technology Shenzhen Graduate School, Shenzhen, Guangdong, China
⨯
Xun Lan,

Affiliation Stanford University, Stanford, California, United States of America
⨯
Ruifeng Xu,

Affiliations School of Computer Science and Technology, Harbin Institute of Technology Shenzhen Graduate School, Shenzhen, Guangdong, China, Key Laboratory of Network Oriented Intelligent Computation, Harbin Institute of Technology Shenzhen Graduate School, Shenzhen, Guangdong, China
⨯
Jiyun Zhou,

Affiliation School of Computer Science and Technology, Harbin Institute of Technology Shenzhen Graduate School, Shenzhen, Guangdong, China
⨯
Xiaolong Wang,

Affiliations School of Computer Science and Technology, Harbin Institute of Technology Shenzhen Graduate School, Shenzhen, Guangdong, China, Key Laboratory of Network Oriented Intelligent Computation, Harbin Institute of Technology Shenzhen Graduate School, Shenzhen, Guangdong, China
⨯
Kuo-Chen Chou

* E-mail: bliu@gordonlifescience.org (BL); kcchou@gordonlifescience.org (KCC)

Affiliations Gordon Life Science Institute, Belmont, Massachusetts, United States of America, Center of Excellence in Genomic Medicine Research (CEGMR), King Abdulaziz University, Jeddah, Saudi Arabia
⨯

iDNA-Prot|dis: Identifying DNA-Binding Proteins by Incorporating Amino Acid Distance-Pairs and Reduced Alphabet Profile into the General Pseudo Amino Acid Composition

Bin Liu,
Jinghao Xu,
Xun Lan,
Ruifeng Xu,
Jiyun Zhou,
Xiaolong Wang,
Kuo-Chen Chou

Published: September 3, 2014
https://doi.org/10.1371/journal.pone.0106691

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Support vector machines
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Protein sequencing
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DNA structure
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