Fast and Sensitive Alignment of Microbial Whole Genome Sequencing Reads to Large Sequence Datasets on a Desktop PC: Application to Metagenomic Datasets and Pathogen Identification

• Lőrinc S. Pongor ,

  Contributed equally to this work with: Lőrinc S. Pongor, Roberto Vera, Balázs Ligeti

  * E-mail: pongorlorinc@gmail.com

  Affiliations Faculty of Information Technology, Pázmány Péter Catholic University, Budapest, Hungary, 2nd Department of Pediatrics, Semmelweis University, Budapest, Hungary

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• Roberto Vera ,

  Contributed equally to this work with: Lőrinc S. Pongor, Roberto Vera, Balázs Ligeti

  Affiliations Faculty of Information Technology, Pázmány Péter Catholic University, Budapest, Hungary, Protein Structure and Bioinformatics Group, International Centre for Genetic Engineering and Biotechnology, Trieste, Italy

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• Balázs Ligeti

  Contributed equally to this work with: Lőrinc S. Pongor, Roberto Vera, Balázs Ligeti

  Affiliation Faculty of Information Technology, Pázmány Péter Catholic University, Budapest, Hungary

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