Pros and Cons of Ion-Torrent Next Generation Sequencing versus Terminal Restriction Fragment Length Polymorphism T-RFLP for Studying the Rumen Bacterial Community

Open Access

Peer-reviewed

Research Article

Gabriel de la Fuente,

Affiliation Institute of Biological Environmental and Rural Sciences, Aberystwyth University, Aberystwyth, Ceredigion, United Kingdom
⨯
Alejandro Belanche,

Affiliation Institute of Biological Environmental and Rural Sciences, Aberystwyth University, Aberystwyth, Ceredigion, United Kingdom
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Susan E. Girwood,

Affiliation Institute of Biological Environmental and Rural Sciences, Aberystwyth University, Aberystwyth, Ceredigion, United Kingdom
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Eric Pinloche,

Affiliation Institute of Biological Environmental and Rural Sciences, Aberystwyth University, Aberystwyth, Ceredigion, United Kingdom
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Toby Wilkinson,

Affiliation Institute of Biological Environmental and Rural Sciences, Aberystwyth University, Aberystwyth, Ceredigion, United Kingdom
⨯
C. Jamie Newbold

* E-mail: cjn@aber.ac.uk

Affiliation Institute of Biological Environmental and Rural Sciences, Aberystwyth University, Aberystwyth, Ceredigion, United Kingdom
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Protozoans
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Next-generation sequencing
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Shannon index
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Ribosomal RNA
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Fermentation
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Bacteria
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Biodiversity
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Genetic fingerprinting
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