A Range Finding Protocol to Support Design for Transcriptomics Experimentation: Examples of In-Vitro and In-Vivo Murine UV Exposure

Oskar Bruning; Wendy Rodenburg; Conny T. van Oostrom; Martijs J. Jonker; Mark de Jong; Rob J. Dekker; Han Rauwerda; Wim A. Ensink; Annemieke de Vries; Timo M. Breit

doi:10.1371/journal.pone.0097089

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Open Access

Peer-reviewed

Research Article

A Range Finding Protocol to Support Design for Transcriptomics Experimentation: Examples of In-Vitro and In-Vivo Murine UV Exposure

Oskar Bruning ,

Contributed equally to this work with: Oskar Bruning, Wendy Rodenburg

Affiliations RNA Biology & Applied Bioinformatics research group and MAD: Dutch Genomics Service & Support Provider, Swammerdam Institute for Life Sciences, Faculty of Science, University of Amsterdam, Amsterdam, the Netherlands, Netherlands Bioinformatics Centre (NBIC), Nijmegen, the Netherlands
⨯
Wendy Rodenburg ,

Contributed equally to this work with: Oskar Bruning, Wendy Rodenburg

Affiliation Centre for Health Protection (GZB), National Institute of Public Health and the Environment (RIVM), Bilthoven, the Netherlands
⨯
Conny T. van Oostrom,

Affiliation Centre for Health Protection (GZB), National Institute of Public Health and the Environment (RIVM), Bilthoven, the Netherlands
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Martijs J. Jonker,

Affiliations RNA Biology & Applied Bioinformatics research group and MAD: Dutch Genomics Service & Support Provider, Swammerdam Institute for Life Sciences, Faculty of Science, University of Amsterdam, Amsterdam, the Netherlands, Netherlands Bioinformatics Centre (NBIC), Nijmegen, the Netherlands
⨯
Mark de Jong,

Current address: ServiceXS B.V., Leiden, the Netherlands

Affiliations RNA Biology & Applied Bioinformatics research group and MAD: Dutch Genomics Service & Support Provider, Swammerdam Institute for Life Sciences, Faculty of Science, University of Amsterdam, Amsterdam, the Netherlands, Netherlands Bioinformatics Centre (NBIC), Nijmegen, the Netherlands
⨯
Rob J. Dekker,

Affiliations RNA Biology & Applied Bioinformatics research group and MAD: Dutch Genomics Service & Support Provider, Swammerdam Institute for Life Sciences, Faculty of Science, University of Amsterdam, Amsterdam, the Netherlands, Netherlands Bioinformatics Centre (NBIC), Nijmegen, the Netherlands
⨯
Han Rauwerda,

Affiliations RNA Biology & Applied Bioinformatics research group and MAD: Dutch Genomics Service & Support Provider, Swammerdam Institute for Life Sciences, Faculty of Science, University of Amsterdam, Amsterdam, the Netherlands, Netherlands Bioinformatics Centre (NBIC), Nijmegen, the Netherlands
⨯
Wim A. Ensink,

Affiliation RNA Biology & Applied Bioinformatics research group and MAD: Dutch Genomics Service & Support Provider, Swammerdam Institute for Life Sciences, Faculty of Science, University of Amsterdam, Amsterdam, the Netherlands
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Annemieke de Vries,

Affiliation Centre for Health Protection (GZB), National Institute of Public Health and the Environment (RIVM), Bilthoven, the Netherlands
⨯
Timo M. Breit

* E-mail: t.m.breit@uva.nl

Affiliations RNA Biology & Applied Bioinformatics research group and MAD: Dutch Genomics Service & Support Provider, Swammerdam Institute for Life Sciences, Faculty of Science, University of Amsterdam, Amsterdam, the Netherlands, Netherlands Bioinformatics Centre (NBIC), Nijmegen, the Netherlands
⨯

A Range Finding Protocol to Support Design for Transcriptomics Experimentation: Examples of In-Vitro and In-Vivo Murine UV Exposure

Oskar Bruning,
Wendy Rodenburg,
Conny T. van Oostrom,
Martijs J. Jonker,
Mark de Jong,
Rob J. Dekker,
Han Rauwerda,
Wim A. Ensink,
Annemieke de Vries,
Timo M. Breit

Published: May 13, 2014
https://doi.org/10.1371/journal.pone.0097089

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