Automated Protein Turnover Calculations from 15N Partial Metabolic Labeling LC/MS Shotgun Proteomics Data

Open Access

Peer-reviewed

Research Article

Automated Protein Turnover Calculations from ¹⁵N Partial Metabolic Labeling LC/MS Shotgun Proteomics Data

David Lyon,

Affiliation Department of Ecogenomics and Systems Biology, University of Vienna, Vienna, Austria
⨯
Maria Angeles Castillejo,

Affiliation Department of Ecogenomics and Systems Biology, University of Vienna, Vienna, Austria
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Christiana Staudinger,

Affiliation Department of Ecogenomics and Systems Biology, University of Vienna, Vienna, Austria
⨯
Wolfram Weckwerth,

Affiliation Department of Ecogenomics and Systems Biology, University of Vienna, Vienna, Austria
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Stefanie Wienkoop,

Affiliation Department of Ecogenomics and Systems Biology, University of Vienna, Vienna, Austria
⨯
Volker Egelhofer

* E-mail: volker.egelhofer@univie.ac.at

Affiliation Department of Ecogenomics and Systems Biology, University of Vienna, Vienna, Austria
⨯

Metabolic labeling
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Computer software
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Proteomic databases
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Isotopes
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Protein synthesis
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Algorithms
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Linear regression analysis
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Experimental design
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