Full Genome Virus Detection in Fecal Samples Using Sensitive Nucleic Acid Preparation, Deep Sequencing, and a Novel Iterative Sequence Classification Algorithm

• Matthew Cotten ,

  * E-mail: mc13@sanger.ac.uk

  Affiliation Wellcome Trust Sanger Institute, Hinxton, United Kingdom

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• Bas Oude Munnink,

  Affiliation Laboratory of Experimental Virology, Department of Medical Microbiology, Center for Infection and Immunity Amsterdam (CINIMA), Academic Medical Center of the University of Amsterdam, Amsterdam, The Netherlands

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• Marta Canuti,

  Affiliation Laboratory of Experimental Virology, Department of Medical Microbiology, Center for Infection and Immunity Amsterdam (CINIMA), Academic Medical Center of the University of Amsterdam, Amsterdam, The Netherlands

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• Martin Deijs,

  Affiliation Laboratory of Experimental Virology, Department of Medical Microbiology, Center for Infection and Immunity Amsterdam (CINIMA), Academic Medical Center of the University of Amsterdam, Amsterdam, The Netherlands

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• Simon J. Watson,

  Affiliation Wellcome Trust Sanger Institute, Hinxton, United Kingdom

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• Paul Kellam,

  Affiliations Wellcome Trust Sanger Institute, Hinxton, United Kingdom, Department of Infection, University College London, London, United Kingdom

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• Lia van der Hoek

  Affiliation Laboratory of Experimental Virology, Department of Medical Microbiology, Center for Infection and Immunity Amsterdam (CINIMA), Academic Medical Center of the University of Amsterdam, Amsterdam, The Netherlands

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