Deep RNA Sequencing Reveals Hidden Features and Dynamics of Early Gene Transcription in Paramecium bursaria Chlorella Virus 1

Guillaume Blanc; Michael Mozar; Irina V. Agarkova; James R. Gurnon; Giane Yanai-Balser; Janet M. Rowe; Yuannan Xia; Jean-Jack Riethoven; David D. Dunigan; James L. Van Etten

doi:10.1371/journal.pone.0090989

Loading metrics

Open Access

Peer-reviewed

Research Article

Deep RNA Sequencing Reveals Hidden Features and Dynamics of Early Gene Transcription in Paramecium bursaria Chlorella Virus 1

Guillaume Blanc ,

* E-mail: guillaume.blanc@igs.cnrs-mrs.fr

Affiliation Laboratoire Information Structurale and Génomique UMR7256 CNRS, Aix-Marseille Université, Marseille, France
⨯
Michael Mozar,

Affiliation Laboratoire Information Structurale and Génomique UMR7256 CNRS, Aix-Marseille Université, Marseille, France
⨯
Irina V. Agarkova,

Affiliations Department of Plant Pathology, University of Nebraska, Lincoln, Nebraska, United States of America, Nebraska Center for Virology, University of Nebraska, Lincoln, Nebraska, United States of America
⨯
James R. Gurnon,

Affiliation Department of Plant Pathology, University of Nebraska, Lincoln, Nebraska, United States of America
⨯
Giane Yanai-Balser,

Affiliation Department of Plant Pathology, University of Nebraska, Lincoln, Nebraska, United States of America
⨯
Janet M. Rowe,

Current address: Department of Civil and Environmental Engineering, University of California, Irvine, California, United States of America

Affiliations Department of Plant Pathology, University of Nebraska, Lincoln, Nebraska, United States of America, Nebraska Center for Virology, University of Nebraska, Lincoln, Nebraska, United States of America
⨯
Yuannan Xia,

Affiliation Center for Biotechnology, University of Nebraska, Lincoln, Nebraska, United States of America
⨯
Jean-Jack Riethoven,

Affiliation Center for Biotechnology, University of Nebraska, Lincoln, Nebraska, United States of America
⨯
David D. Dunigan,

Affiliations Department of Plant Pathology, University of Nebraska, Lincoln, Nebraska, United States of America, Nebraska Center for Virology, University of Nebraska, Lincoln, Nebraska, United States of America
⨯
James L. Van Etten

Affiliations Department of Plant Pathology, University of Nebraska, Lincoln, Nebraska, United States of America, Nebraska Center for Virology, University of Nebraska, Lincoln, Nebraska, United States of America
⨯

Deep RNA Sequencing Reveals Hidden Features and Dynamics of Early Gene Transcription in Paramecium bursaria Chlorella Virus 1

Guillaume Blanc,
Michael Mozar,
Irina V. Agarkova,
James R. Gurnon,
Giane Yanai-Balser,
Janet M. Rowe,
Yuannan Xia,
Jean-Jack Riethoven,
David D. Dunigan,
James L. Van Etten

Published: March 7, 2014
https://doi.org/10.1371/journal.pone.0090989

Reader Comments (0)

Post a new comment on this article

Subject Areas
?

For more information about PLOS Subject Areas, click here.
We want your feedback. Do these Subject Areas make sense for this article? Click the target next to the incorrect Subject Area and let us know. Thanks for your help!

Messenger RNA
Is the Subject Area "Messenger RNA" applicable to this article?

Thanks for your feedback.
DNA transcription
Is the Subject Area "DNA transcription" applicable to this article?

Thanks for your feedback.
Introns
Is the Subject Area "Introns" applicable to this article?

Thanks for your feedback.
Genomics
Is the Subject Area "Genomics" applicable to this article?

Thanks for your feedback.
Microarrays
Is the Subject Area "Microarrays" applicable to this article?

Thanks for your feedback.
Polyadenylation
Is the Subject Area "Polyadenylation" applicable to this article?

Thanks for your feedback.
Sequence motif analysis
Is the Subject Area "Sequence motif analysis" applicable to this article?

Thanks for your feedback.
Viral gene expression
Is the Subject Area "Viral gene expression" applicable to this article?

Thanks for your feedback.