Fast Segmentation of Stained Nuclei in Terabyte-Scale, Time Resolved 3D Microscopy Image Stacks

• Johannes Stegmaier ,

  * E-mail: johannes.stegmaier@kit.edu

  Affiliation Institute for Applied Computer Science (IAI), Karlsruhe Institute of Technology, Karlsruhe, Germany

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• Jens C. Otte,

  Affiliation Institute for Toxicology and Genetics (ITG), Karlsruhe Institute of Technology, Karlsruhe, Germany

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• Andrei Kobitski,

  Affiliations Institute for Toxicology and Genetics (ITG), Karlsruhe Institute of Technology, Karlsruhe, Germany, Institute of Applied Physics (APH) and Center for Functional Nanostructures (CFN), Karlsruhe Institute of Technology, Karlsruhe, Germany

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• Andreas Bartschat,

  Affiliation Institute for Applied Computer Science (IAI), Karlsruhe Institute of Technology, Karlsruhe, Germany

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• Ariel Garcia,

  Affiliation Steinbuch Center for Computing (SCC), Karlsruhe Institute of Technology, Karlsruhe, Germany

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• G. Ulrich Nienhaus,

  Affiliations Institute for Toxicology and Genetics (ITG), Karlsruhe Institute of Technology, Karlsruhe, Germany, Institute of Applied Physics (APH) and Center for Functional Nanostructures (CFN), Karlsruhe Institute of Technology, Karlsruhe, Germany, Department of Physics, University of Illinois at Urbana-Champaign, Urbana, Illinois, United States of America

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• Uwe Strähle,

  Affiliation Institute for Toxicology and Genetics (ITG), Karlsruhe Institute of Technology, Karlsruhe, Germany

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• Ralf Mikut

  Affiliation Institute for Applied Computer Science (IAI), Karlsruhe Institute of Technology, Karlsruhe, Germany

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