Simplified Method for Predicting a Functional Class of Proteins in Transcription Factor Complexes

Marek J. Piatek; Michael C. Schramm; Dharani D. Burra; Abdulaziz binShbreen; Boris R. Jankovic; Rajesh Chowdhary; John A.C. Archer; Vladimir B. Bajic

doi:10.1371/journal.pone.0068857

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Open Access

Peer-reviewed

Research Article

Simplified Method for Predicting a Functional Class of Proteins in Transcription Factor Complexes

Marek J. Piatek ,

Contributed equally to this work with: Marek J. Piatek, Michael C. Schramm

Affiliation King Abdullah University of Science and Technology (KAUST), Computer, Electrical and Mathematical Sciences and Engineering Division, Computational Bioscience Research Center, Thuwal, Kingdom of Saudi Arabia
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Michael C. Schramm ,

Contributed equally to this work with: Marek J. Piatek, Michael C. Schramm

Affiliation King Abdullah University of Science and Technology (KAUST), Computer, Electrical and Mathematical Sciences and Engineering Division, Computational Bioscience Research Center, Thuwal, Kingdom of Saudi Arabia
⨯
Dharani D. Burra,

Affiliation King Abdullah University of Science and Technology (KAUST), Computer, Electrical and Mathematical Sciences and Engineering Division, Computational Bioscience Research Center, Thuwal, Kingdom of Saudi Arabia
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Abdulaziz binShbreen,

Affiliation King Abdullah University of Science and Technology (KAUST), Computer, Electrical and Mathematical Sciences and Engineering Division, Computational Bioscience Research Center, Thuwal, Kingdom of Saudi Arabia
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Boris R. Jankovic,

Affiliation King Abdullah University of Science and Technology (KAUST), Computer, Electrical and Mathematical Sciences and Engineering Division, Computational Bioscience Research Center, Thuwal, Kingdom of Saudi Arabia
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Rajesh Chowdhary,

Affiliation Biomedical Informatics Research Center, MCRF, Marshfield Clinic, Marshfield, Wisconsin, United States of America
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John A.C. Archer,

Affiliation King Abdullah University of Science and Technology (KAUST), Computer, Electrical and Mathematical Sciences and Engineering Division, Computational Bioscience Research Center, Thuwal, Kingdom of Saudi Arabia
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Vladimir B. Bajic

* E-mail: vladimir.bajic@kaust.edu.sa

Affiliation King Abdullah University of Science and Technology (KAUST), Computer, Electrical and Mathematical Sciences and Engineering Division, Computational Bioscience Research Center, Thuwal, Kingdom of Saudi Arabia
⨯

Simplified Method for Predicting a Functional Class of Proteins in Transcription Factor Complexes

Marek J. Piatek,
Michael C. Schramm,
Dharani D. Burra,
Abdulaziz binShbreen,
Boris R. Jankovic,
Rajesh Chowdhary,
John A.C. Archer,
Vladimir B. Bajic

Published: July 12, 2013
https://doi.org/10.1371/journal.pone.0068857

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Protein interactions
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Transcription factors
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Transcriptional control
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DNA-binding proteins
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Binding analysis
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Protein sequencing
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Protein domains
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Web-based applications
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