Identifying and Classifying Trait Linked Polymorphisms in Non-Reference Species by Walking Coloured de Bruijn Graphs

Open Access

Peer-reviewed

Research Article

Richard M. Leggett,

Affiliation The Sainsbury Laboratory, Norwich Research Park, Colney, Norwich, United Kingdom
⨯
Ricardo H. Ramirez-Gonzalez,

Affiliation The Genome Analysis Centre, Norwich Research Park, Colney, Norwich, United Kingdom
⨯
Walter Verweij,

Affiliation The Sainsbury Laboratory, Norwich Research Park, Colney, Norwich, United Kingdom
⨯
Cintia G. Kawashima,

Affiliation The Sainsbury Laboratory, Norwich Research Park, Colney, Norwich, United Kingdom
⨯
Zamin Iqbal,

Affiliation Wellcome Trust Centre for Human Genetics, University of Oxford, Oxford, United Kingdom
⨯
Jonathan D. G. Jones,

Affiliation The Sainsbury Laboratory, Norwich Research Park, Colney, Norwich, United Kingdom
⨯
Mario Caccamo,

Affiliation The Genome Analysis Centre, Norwich Research Park, Colney, Norwich, United Kingdom
⨯
Daniel MacLean

* E-mail: dan.maclean@tsl.ac.uk

Affiliation The Sainsbury Laboratory, Norwich Research Park, Colney, Norwich, United Kingdom
⨯

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Single nucleotide polymorphisms
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Graphs
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Heterozygosity
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Plant genomics
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Arabidopsis thaliana
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Dideoxy DNA sequencing
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Sequence alignment
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Alleles
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