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Open Access

Peer-reviewed

Research Article

Alignment of Helical Membrane Protein Sequences Using AlignMe

Marcus Stamm ,

Contributed equally to this work with: Marcus Stamm, René Staritzbichler

Affiliation Computational Structural Biology Group, Max Planck Institute of Biophysics, Frankfurt am Main, Germany
⨯
René Staritzbichler ,

Contributed equally to this work with: Marcus Stamm, René Staritzbichler

Current address: Translational Oncology (TRON), Johannes Gutenberg University Medical Center Mainz, Mainz, Germany

Affiliation Computational Structural Biology Group, Max Planck Institute of Biophysics, Frankfurt am Main, Germany
⨯
Kamil Khafizov,

Current address: Department of Systems and Computational Biology, Albert Einstein College of Medicine, Bronx, New York, United States of America

Affiliation Computational Structural Biology Group, Max Planck Institute of Biophysics, Frankfurt am Main, Germany
⨯
Lucy R. Forrest

* E-mail: lucy.forrest@biophys.mpg.de

Affiliation Computational Structural Biology Group, Max Planck Institute of Biophysics, Frankfurt am Main, Germany
⨯

Alignment of Helical Membrane Protein Sequences Using AlignMe

Marcus Stamm,
René Staritzbichler,
Kamil Khafizov,
Lucy R. Forrest

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Published: March 4, 2013
https://doi.org/10.1371/journal.pone.0057731

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Sequence alignment
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Protein structure comparison
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Multiple alignment calculation
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Membrane proteins
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Protein structure
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Integral membrane proteins
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Protein structure prediction
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Protein structure databases
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