The Carcinogenic Liver Fluke, Clonorchis sinensis: New Assembly, Reannotation and Analysis of the Genome and Characterization of Tissue Transcriptomes

Yan Huang; Wenjun Chen; Xiaoyun Wang; Hailiang Liu; Yangyi Chen; Lei Guo; Fang Luo; Jiufeng Sun; Qiang Mao; Pei Liang; Zhizhi Xie; Chenhui Zhou; Yanli Tian; Xiaoli Lv; Lisi Huang; Juanjuan Zhou; Yue Hu; Ran Li; Fan Zhang; Huali Lei; Wenfang Li; Xuchu Hu; Chi Liang; Jin Xu; Xuerong Li; Xinbing Yu

doi:10.1371/journal.pone.0054732

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Open Access

Peer-reviewed

Research Article

The Carcinogenic Liver Fluke, Clonorchis sinensis: New Assembly, Reannotation and Analysis of the Genome and Characterization of Tissue Transcriptomes

Yan Huang ,

Contributed equally to this work with: Yan Huang, Wenjun Chen

Affiliations Department of Parasitology, Zhongshan School of Medicine, Sun Yat-sen University, Guangzhou, Guangdong, People’s Republic of China, Key Laboratory for Tropical Diseases Control of Ministry of Education, Sun Yat-sen University, Guangzhou, Guangdong, People’s Republic of China
⨯
Wenjun Chen ,

Contributed equally to this work with: Yan Huang, Wenjun Chen

Affiliations Department of Parasitology, Zhongshan School of Medicine, Sun Yat-sen University, Guangzhou, Guangdong, People’s Republic of China, Key Laboratory for Tropical Diseases Control of Ministry of Education, Sun Yat-sen University, Guangzhou, Guangdong, People’s Republic of China
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Xiaoyun Wang,

Affiliations Department of Parasitology, Zhongshan School of Medicine, Sun Yat-sen University, Guangzhou, Guangdong, People’s Republic of China, Key Laboratory for Tropical Diseases Control of Ministry of Education, Sun Yat-sen University, Guangzhou, Guangdong, People’s Republic of China
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Hailiang Liu,

Affiliation Guangzhou iGenomics Co., Ltd, Guangzhou, Guangdong, People’s Republic of China
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Yangyi Chen,

Affiliation Guangzhou iGenomics Co., Ltd, Guangzhou, Guangdong, People’s Republic of China
⨯
Lei Guo,

Affiliation Guangzhou iGenomics Co., Ltd, Guangzhou, Guangdong, People’s Republic of China
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Fang Luo,

Affiliation Guangzhou iGenomics Co., Ltd, Guangzhou, Guangdong, People’s Republic of China
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Jiufeng Sun,

Affiliations Department of Parasitology, Zhongshan School of Medicine, Sun Yat-sen University, Guangzhou, Guangdong, People’s Republic of China, Key Laboratory for Tropical Diseases Control of Ministry of Education, Sun Yat-sen University, Guangzhou, Guangdong, People’s Republic of China
⨯
Qiang Mao,

Affiliations Department of Parasitology, Zhongshan School of Medicine, Sun Yat-sen University, Guangzhou, Guangdong, People’s Republic of China, Key Laboratory for Tropical Diseases Control of Ministry of Education, Sun Yat-sen University, Guangzhou, Guangdong, People’s Republic of China
⨯
Pei Liang,

Affiliations Department of Parasitology, Zhongshan School of Medicine, Sun Yat-sen University, Guangzhou, Guangdong, People’s Republic of China, Key Laboratory for Tropical Diseases Control of Ministry of Education, Sun Yat-sen University, Guangzhou, Guangdong, People’s Republic of China
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Zhizhi Xie,

Affiliations Department of Parasitology, Zhongshan School of Medicine, Sun Yat-sen University, Guangzhou, Guangdong, People’s Republic of China, Key Laboratory for Tropical Diseases Control of Ministry of Education, Sun Yat-sen University, Guangzhou, Guangdong, People’s Republic of China
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Chenhui Zhou,

Affiliations Department of Parasitology, Zhongshan School of Medicine, Sun Yat-sen University, Guangzhou, Guangdong, People’s Republic of China, Key Laboratory for Tropical Diseases Control of Ministry of Education, Sun Yat-sen University, Guangzhou, Guangdong, People’s Republic of China
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Yanli Tian,

Affiliations Department of Parasitology, Zhongshan School of Medicine, Sun Yat-sen University, Guangzhou, Guangdong, People’s Republic of China, Key Laboratory for Tropical Diseases Control of Ministry of Education, Sun Yat-sen University, Guangzhou, Guangdong, People’s Republic of China
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Xiaoli Lv,

Affiliations Department of Parasitology, Zhongshan School of Medicine, Sun Yat-sen University, Guangzhou, Guangdong, People’s Republic of China, Key Laboratory for Tropical Diseases Control of Ministry of Education, Sun Yat-sen University, Guangzhou, Guangdong, People’s Republic of China
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Lisi Huang,

Affiliations Department of Parasitology, Zhongshan School of Medicine, Sun Yat-sen University, Guangzhou, Guangdong, People’s Republic of China, Key Laboratory for Tropical Diseases Control of Ministry of Education, Sun Yat-sen University, Guangzhou, Guangdong, People’s Republic of China
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Juanjuan Zhou,

Affiliations Department of Parasitology, Zhongshan School of Medicine, Sun Yat-sen University, Guangzhou, Guangdong, People’s Republic of China, Key Laboratory for Tropical Diseases Control of Ministry of Education, Sun Yat-sen University, Guangzhou, Guangdong, People’s Republic of China
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Yue Hu,

Affiliations Department of Parasitology, Zhongshan School of Medicine, Sun Yat-sen University, Guangzhou, Guangdong, People’s Republic of China, Key Laboratory for Tropical Diseases Control of Ministry of Education, Sun Yat-sen University, Guangzhou, Guangdong, People’s Republic of China
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Ran Li,

Affiliations Department of Parasitology, Zhongshan School of Medicine, Sun Yat-sen University, Guangzhou, Guangdong, People’s Republic of China, Key Laboratory for Tropical Diseases Control of Ministry of Education, Sun Yat-sen University, Guangzhou, Guangdong, People’s Republic of China
⨯
Fan Zhang,

Affiliations Department of Parasitology, Zhongshan School of Medicine, Sun Yat-sen University, Guangzhou, Guangdong, People’s Republic of China, Key Laboratory for Tropical Diseases Control of Ministry of Education, Sun Yat-sen University, Guangzhou, Guangdong, People’s Republic of China
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Huali Lei,

Affiliations Department of Parasitology, Zhongshan School of Medicine, Sun Yat-sen University, Guangzhou, Guangdong, People’s Republic of China, Key Laboratory for Tropical Diseases Control of Ministry of Education, Sun Yat-sen University, Guangzhou, Guangdong, People’s Republic of China
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Wenfang Li,

Affiliations Department of Parasitology, Zhongshan School of Medicine, Sun Yat-sen University, Guangzhou, Guangdong, People’s Republic of China, Key Laboratory for Tropical Diseases Control of Ministry of Education, Sun Yat-sen University, Guangzhou, Guangdong, People’s Republic of China
⨯
Xuchu Hu,

Affiliations Department of Parasitology, Zhongshan School of Medicine, Sun Yat-sen University, Guangzhou, Guangdong, People’s Republic of China, Key Laboratory for Tropical Diseases Control of Ministry of Education, Sun Yat-sen University, Guangzhou, Guangdong, People’s Republic of China
⨯
Chi Liang,

Affiliations Department of Parasitology, Zhongshan School of Medicine, Sun Yat-sen University, Guangzhou, Guangdong, People’s Republic of China, Key Laboratory for Tropical Diseases Control of Ministry of Education, Sun Yat-sen University, Guangzhou, Guangdong, People’s Republic of China
⨯
Jin Xu ,

* E-mail: yuxb@mail.sysu.edu.cn (XBY); xuerong2@mail.sysu.edu.cn (XRL); xujin@mail.sysu.edu.cn (JX)

Affiliations Department of Parasitology, Zhongshan School of Medicine, Sun Yat-sen University, Guangzhou, Guangdong, People’s Republic of China, Key Laboratory for Tropical Diseases Control of Ministry of Education, Sun Yat-sen University, Guangzhou, Guangdong, People’s Republic of China
⨯
Xuerong Li ,

* E-mail: yuxb@mail.sysu.edu.cn (XBY); xuerong2@mail.sysu.edu.cn (XRL); xujin@mail.sysu.edu.cn (JX)

Affiliations Department of Parasitology, Zhongshan School of Medicine, Sun Yat-sen University, Guangzhou, Guangdong, People’s Republic of China, Key Laboratory for Tropical Diseases Control of Ministry of Education, Sun Yat-sen University, Guangzhou, Guangdong, People’s Republic of China
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[ ... ],
Xinbing Yu

* E-mail: yuxb@mail.sysu.edu.cn (XBY); xuerong2@mail.sysu.edu.cn (XRL); xujin@mail.sysu.edu.cn (JX)

Affiliations Department of Parasitology, Zhongshan School of Medicine, Sun Yat-sen University, Guangzhou, Guangdong, People’s Republic of China, Key Laboratory for Tropical Diseases Control of Ministry of Education, Sun Yat-sen University, Guangzhou, Guangdong, People’s Republic of China
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The Carcinogenic Liver Fluke, Clonorchis sinensis: New Assembly, Reannotation and Analysis of the Genome and Characterization of Tissue Transcriptomes

Yan Huang,
Wenjun Chen,
Xiaoyun Wang,
Hailiang Liu,
Yangyi Chen,
Lei Guo,
Fang Luo,
Jiufeng Sun,
Qiang Mao,
Pei Liang

Published: January 30, 2013
https://doi.org/10.1371/journal.pone.0054732

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