Sliding Window Analyses for Optimal Selection of Mini-Barcodes, and Application to 454-Pyrosequencing for Specimen Identification from Degraded DNA

Open Access

Peer-reviewed

Research Article

Stephane Boyer ,

* E-mail: stephane.boyer@lincoln.ac.nz

Affiliation Department of Ecology, Faculty of Agriculture and Life Sciences, Lincoln University, Lincoln, New Zealand
⨯
Samuel D. J. Brown,

Affiliation Bio-Protection Research Centre, Lincoln University, Lincoln, New Zealand
⨯
Rupert A. Collins,

Affiliation Bio-Protection Research Centre, Lincoln University, Lincoln, New Zealand
⨯
Robert H. Cruickshank,

Affiliation Department of Ecology, Faculty of Agriculture and Life Sciences, Lincoln University, Lincoln, New Zealand
⨯
Marie-Caroline Lefort,

Affiliation Bio-Protection Research Centre, Lincoln University, Lincoln, New Zealand
⨯
Jagoba Malumbres-Olarte,

Affiliation Department of Ecology, Faculty of Agriculture and Life Sciences, Lincoln University, Lincoln, New Zealand
⨯
Stephen D. Wratten

Affiliation Bio-Protection Research Centre, Lincoln University, Lincoln, New Zealand
⨯

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DNA libraries
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DNA barcoding
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DNA sequencing
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Mitochondria
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Phylogenetic analysis
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Polymerase chain reaction
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