Occupancy Classification of Position Weight Matrix-Inferred Transcription Factor Binding Sites

Hollis Wright; Aaron Cohen; Kemal Sönmez; Gregory Yochum; Shannon McWeeney

doi:10.1371/journal.pone.0026160

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Open Access

Peer-reviewed

Research Article

Occupancy Classification of Position Weight Matrix-Inferred Transcription Factor Binding Sites

Hollis Wright ,

* E-mail: wrighth@ohsu.edu

Affiliation Division of Bioinformatics and Computational Biology, Department of Medical Informatics and Clinical Epidemiology, Oregon Health and Science University, Portland, Oregon, United States of America
⨯
Aaron Cohen ,

Contributed equally to this work with: Aaron Cohen, Kemal Sönmez, Gregory Yochum

Affiliation Division of Bioinformatics and Computational Biology, Department of Medical Informatics and Clinical Epidemiology, Oregon Health and Science University, Portland, Oregon, United States of America
⨯
Kemal Sönmez ,

Contributed equally to this work with: Aaron Cohen, Kemal Sönmez, Gregory Yochum

Affiliation Division of Bioinformatics and Computational Biology, Department of Medical Informatics and Clinical Epidemiology, Oregon Health and Science University, Portland, Oregon, United States of America
⨯
Gregory Yochum ,

Contributed equally to this work with: Aaron Cohen, Kemal Sönmez, Gregory Yochum

Affiliation Department of Biochemistry and Molecular Biology, The Pennsylvania State University College of Medicine, Hershey, Pennsylvania, United States of America
⨯
Shannon McWeeney

Affiliations Division of Bioinformatics and Computational Biology, Department of Medical Informatics and Clinical Epidemiology, Oregon Health and Science University, Portland, Oregon, United States of America, Division of Biostatistics, Department of Public Health and Preventive Medicine, Oregon Health and Science University, Portland, Oregon, United States of America, Oregon Clinical and Translational Research Institute, Oregon Health and Science University, Portland, Oregon, United States of America, OHSU Knight Cancer Institute, Oregon Health and Science University, Portland, Oregon, United States of America
⨯

Occupancy Classification of Position Weight Matrix-Inferred Transcription Factor Binding Sites

Hollis Wright,
Aaron Cohen,
Kemal Sönmez,
Gregory Yochum,
Shannon McWeeney

Published: November 4, 2011
https://doi.org/10.1371/journal.pone.0026160

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