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Download of SLIME

Posted by jocke_tuffing on 10 Jun 2015 at 11:33 GMT

Dear authors,

Thank you for your study,

Is there a source of installation online available for the SLIME pipeline?

Best regards
Olov Svartström

No competing interests declared.

RE: Download of SLIME

elipapa replied to jocke_tuffing on 13 Jun 2015 at 10:09 GMT

Dear Olov,

you can find a replica of the pipeline as it was used in 2012 and rewritten in python at:

http://nbviewer.ipython.o...

Not all figures are there yet, but will be soon.

Internal development of SLiME continues and the version used in the paper quickly was outdated. We decided to not release the pipeline (mostly in R) as it was used in 2012.

Hope this helps.
Eliseo

Competing interests declared: i am the lead author of the paper