Alterations in the nasopharyngeal microbiome associated with SARS-CoV-2 infection status and disease severity

• Nick P. G. Gauthier,

  Roles Conceptualization, Data curation, Formal analysis, Investigation, Methodology, Project administration, Validation, Visualization, Writing – original draft, Writing – review & editing

  Affiliation Department of Microbiology and Immunology, University of British Columbia, Vancouver, British Columbia, Canada

  https://orcid.org/0000-0001-9484-6223

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• Kerstin Locher,

  Roles Conceptualization, Data curation, Funding acquisition, Investigation, Methodology, Resources, Writing – review & editing

  Affiliations Division of Medical Microbiology, Vancouver General Hospital, Vancouver, British Columbia, Canada, Department of Pathology and Laboratory Medicine, University of British Columbia, Vancouver, British Columbia, Canada

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• Clayton MacDonald,

  Roles Conceptualization, Investigation, Writing – review & editing

  Affiliations Division of Medical Microbiology, Vancouver General Hospital, Vancouver, British Columbia, Canada, Department of Pathology and Laboratory Medicine, University of British Columbia, Vancouver, British Columbia, Canada

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• Samuel D. Chorlton,

  Roles Conceptualization, Data curation, Formal analysis, Investigation, Software, Supervision, Visualization, Writing – review & editing

  Affiliations Department of Pathology and Laboratory Medicine, University of British Columbia, Vancouver, British Columbia, Canada, BugSeq Bioinformatics Inc, Vancouver, British Columbia, Canada

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• Marthe Charles ,

  Contributed equally to this work with: Marthe Charles, Amee R. Manges

  Roles Conceptualization, Funding acquisition, Investigation, Project administration, Resources, Writing – review & editing

  Affiliations Division of Medical Microbiology, Vancouver General Hospital, Vancouver, British Columbia, Canada, Department of Pathology and Laboratory Medicine, University of British Columbia, Vancouver, British Columbia, Canada

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• Amee R. Manges

  Contributed equally to this work with: Marthe Charles, Amee R. Manges

  Roles Conceptualization, Funding acquisition, Investigation, Project administration, Resources, Supervision, Writing – original draft, Writing – review & editing

  * E-mail: amee.manges@ubc.ca

  Affiliations British Columbia Centre for Disease Control, Vancouver, British Columbia, Canada, School of Population and Public Health, University of British Columbia, Vancouver, British Columbia, Canada

  https://orcid.org/0000-0003-2462-7249

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