About the Authors

Sophie O’Reilly

Roles Conceptualization, Data curation, Formal analysis, Funding acquisition, Investigation, Methodology, Validation, Visualization, Writing – original draft, Writing – review & editing

Affiliations Centre for Experimental Pathogen Host Research (CEPHR), University College Dublin, Belfield, Dublin, Ireland, School of Medicine, University College Dublin, Belfield, Dublin, Ireland

Grace Kenny

Roles Investigation, Resources, Validation, Writing – review & editing

Affiliations Centre for Experimental Pathogen Host Research (CEPHR), University College Dublin, Belfield, Dublin, Ireland, School of Medicine, University College Dublin, Belfield, Dublin, Ireland, Department of Infectious Diseases, St Vincent’s University Hospital, Elm Park, Dublin, Ireland

Tamara Alrawahneh

Roles Investigation, Writing – review & editing

Affiliations Centre for Experimental Pathogen Host Research (CEPHR), University College Dublin, Belfield, Dublin, Ireland, School of Medicine, University College Dublin, Belfield, Dublin, Ireland

Nathan Francois

Roles Investigation, Writing – review & editing

Affiliations Centre for Experimental Pathogen Host Research (CEPHR), University College Dublin, Belfield, Dublin, Ireland, School of Medicine, University College Dublin, Belfield, Dublin, Ireland

Lili Gu

Roles Investigation, Project administration, Writing – review & editing

Affiliations Centre for Experimental Pathogen Host Research (CEPHR), University College Dublin, Belfield, Dublin, Ireland, School of Medicine, University College Dublin, Belfield, Dublin, Ireland

Matthew Angeliadis

Roles Investigation, Writing – review & editing

Affiliations Centre for Experimental Pathogen Host Research (CEPHR), University College Dublin, Belfield, Dublin, Ireland, School of Medicine, University College Dublin, Belfield, Dublin, Ireland

Valentin de Masson d’Autume

Roles Software, Writing – review & editing

Affiliations Centre for Experimental Pathogen Host Research (CEPHR), University College Dublin, Belfield, Dublin, Ireland, School of Medicine, University College Dublin, Belfield, Dublin, Ireland

Alejandro Garcia Leon

Roles Project administration, Resources, Writing – review & editing

Affiliations Centre for Experimental Pathogen Host Research (CEPHR), University College Dublin, Belfield, Dublin, Ireland, School of Medicine, University College Dublin, Belfield, Dublin, Ireland

Eoin R. Feeney

Roles Resources, Writing – review & editing

Affiliations Centre for Experimental Pathogen Host Research (CEPHR), University College Dublin, Belfield, Dublin, Ireland, School of Medicine, University College Dublin, Belfield, Dublin, Ireland, Department of Infectious Diseases, St Vincent’s University Hospital, Elm Park, Dublin, Ireland

Obada Yousif

Roles Resources, Writing – review & editing

Affiliation Endocrinology Department, Wexford General Hospital, Carricklawn, Wexford, Ireland

Aoife Cotter

Roles Resources, Writing – review & editing

Affiliations Centre for Experimental Pathogen Host Research (CEPHR), University College Dublin, Belfield, Dublin, Ireland, School of Medicine, University College Dublin, Belfield, Dublin, Ireland, Department of Infectious Diseases, Mater Misericordiae University Hospital, Eccles St, Dublin, Ireland

Eoghan de Barra

Roles Resources, Writing – review & editing

Affiliations Department of Infectious Diseases, Beaumont Hospital, Beaumont, Dublin, Ireland, Department of International Health and Tropical Medicine, Royal College of Surgeons in Ireland, Dublin, Ireland

Mary Horgan

Roles Resources, Writing – review & editing

Affiliation Department of Infectious Diseases, Cork University Hospital, Wilton, Cork, Ireland

Patrick W. G. Mallon

Roles Conceptualization, Funding acquisition, Resources, Supervision, Validation, Writing – review & editing

Affiliations Centre for Experimental Pathogen Host Research (CEPHR), University College Dublin, Belfield, Dublin, Ireland, School of Medicine, University College Dublin, Belfield, Dublin, Ireland, Department of Infectious Diseases, St Vincent’s University Hospital, Elm Park, Dublin, Ireland

Virginie Gautier

Roles Conceptualization, Data curation, Funding acquisition, Methodology, Project administration, Resources, Supervision, Validation, Writing – review & editing

Virginie.gautier@ucd.ie

Affiliations Centre for Experimental Pathogen Host Research (CEPHR), University College Dublin, Belfield, Dublin, Ireland, School of Medicine, University College Dublin, Belfield, Dublin, Ireland, Conway Institute of Biomedical and Biomolecular Research, University College Dublin, Belfield, Dublin 4, Ireland

Competing Interests

E.F. has received consulting fees from Gilead, ViiV and Vidacare Ireland, and has been awarded a grant from Science Foundation Ireland outside the submitted work. E.d.B. has received consulting fees from Sanofi Pasteur and an honoraria/travel grant from Pfizer. P.M. has received honoraria and/or travel grants from Gilead Sciences, MSD, Astrazeneca, and ViiV Healthcare, and has been awarded grants by Science Foundation Ireland outside the submitted work. The remaining authors declare that no competing interests exist. This does not alter our adherence to PLOS ONE policies on sharing data and materials. There are no patents, products in development or marketed products associated with this research to declare.