SARS-CoV-2 transmission routes from genetic data: A Danish case study

Andreas Bluhm; Matthias Christandl; Fulvio Gesmundo; Frederik Ravn Klausen; Laura Mančinska; Vincent Steffan; Daniel Stilck França; Albert H. Werner

doi:10.1371/journal.pone.0241405

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Peer-reviewed

Research Article

SARS-CoV-2 transmission routes from genetic data: A Danish case study

Andreas Bluhm ,

Contributed equally to this work with: Andreas Bluhm, Matthias Christandl, Fulvio Gesmundo, Frederik Ravn Klausen, Laura Mančinska, Vincent Steffan, Daniel Stilck França, Albert H. Werner

Roles Conceptualization, Methodology, Writing – original draft

Affiliation Department of Mathematical Sciences, University of Copenhagen, Copenhagen, Denmark

https://orcid.org/0000-0003-4796-7633

⨯
Matthias Christandl ,

Contributed equally to this work with: Andreas Bluhm, Matthias Christandl, Fulvio Gesmundo, Frederik Ravn Klausen, Laura Mančinska, Vincent Steffan, Daniel Stilck França, Albert H. Werner

Roles Conceptualization, Supervision, Writing – original draft

* E-mail: christandl@math.ku.dk

Affiliation Department of Mathematical Sciences, University of Copenhagen, Copenhagen, Denmark
⨯
Fulvio Gesmundo ,

Contributed equally to this work with: Andreas Bluhm, Matthias Christandl, Fulvio Gesmundo, Frederik Ravn Klausen, Laura Mančinska, Vincent Steffan, Daniel Stilck França, Albert H. Werner

Roles Data curation, Software, Writing – original draft

Affiliation Department of Mathematical Sciences, University of Copenhagen, Copenhagen, Denmark
⨯
Frederik Ravn Klausen ,

Contributed equally to this work with: Andreas Bluhm, Matthias Christandl, Fulvio Gesmundo, Frederik Ravn Klausen, Laura Mančinska, Vincent Steffan, Daniel Stilck França, Albert H. Werner

Roles Conceptualization, Investigation, Writing – original draft

Affiliation Department of Mathematical Sciences, University of Copenhagen, Copenhagen, Denmark
⨯
Laura Mančinska ,

Contributed equally to this work with: Andreas Bluhm, Matthias Christandl, Fulvio Gesmundo, Frederik Ravn Klausen, Laura Mančinska, Vincent Steffan, Daniel Stilck França, Albert H. Werner

Roles Conceptualization, Investigation, Writing – original draft

Affiliation Department of Mathematical Sciences, University of Copenhagen, Copenhagen, Denmark
⨯
Vincent Steffan ,

Contributed equally to this work with: Andreas Bluhm, Matthias Christandl, Fulvio Gesmundo, Frederik Ravn Klausen, Laura Mančinska, Vincent Steffan, Daniel Stilck França, Albert H. Werner

Roles Software, Visualization, Writing – original draft

Affiliation Department of Mathematical Sciences, University of Copenhagen, Copenhagen, Denmark
⨯
Daniel Stilck França ,

Contributed equally to this work with: Andreas Bluhm, Matthias Christandl, Fulvio Gesmundo, Frederik Ravn Klausen, Laura Mančinska, Vincent Steffan, Daniel Stilck França, Albert H. Werner

Roles Conceptualization, Methodology, Writing – original draft

Affiliation Department of Mathematical Sciences, University of Copenhagen, Copenhagen, Denmark
⨯
Albert H. Werner

Contributed equally to this work with: Andreas Bluhm, Matthias Christandl, Fulvio Gesmundo, Frederik Ravn Klausen, Laura Mančinska, Vincent Steffan, Daniel Stilck França, Albert H. Werner

Roles Conceptualization, Methodology, Writing – original draft

Affiliation Department of Mathematical Sciences, University of Copenhagen, Copenhagen, Denmark
⨯

SARS-CoV-2 transmission routes from genetic data: A Danish case study

Andreas Bluhm,
Matthias Christandl,
Fulvio Gesmundo,
Frederik Ravn Klausen,
Laura Mančinska,
Vincent Steffan,
Daniel Stilck França,
Albert H. Werner

Published: October 29, 2020
https://doi.org/10.1371/journal.pone.0241405

About the Authors

Andreas Bluhm

Contributed equally to this work with: Andreas Bluhm, Matthias Christandl, Fulvio Gesmundo, Frederik Ravn Klausen, Laura Mančinska, Vincent Steffan, Daniel Stilck França, Albert H. Werner

Roles Conceptualization, Methodology, Writing – original draft

Affiliation Department of Mathematical Sciences, University of Copenhagen, Copenhagen, Denmark

https://orcid.org/0000-0003-4796-7633

Matthias Christandl

Contributed equally to this work with: Andreas Bluhm, Matthias Christandl, Fulvio Gesmundo, Frederik Ravn Klausen, Laura Mančinska, Vincent Steffan, Daniel Stilck França, Albert H. Werner

Roles Conceptualization, Supervision, Writing – original draft

* E-mail: christandl@math.ku.dk

Affiliation Department of Mathematical Sciences, University of Copenhagen, Copenhagen, Denmark

Fulvio Gesmundo

Contributed equally to this work with: Andreas Bluhm, Matthias Christandl, Fulvio Gesmundo, Frederik Ravn Klausen, Laura Mančinska, Vincent Steffan, Daniel Stilck França, Albert H. Werner

Roles Data curation, Software, Writing – original draft

Affiliation Department of Mathematical Sciences, University of Copenhagen, Copenhagen, Denmark

Frederik Ravn Klausen

Contributed equally to this work with: Andreas Bluhm, Matthias Christandl, Fulvio Gesmundo, Frederik Ravn Klausen, Laura Mančinska, Vincent Steffan, Daniel Stilck França, Albert H. Werner

Roles Conceptualization, Investigation, Writing – original draft

Affiliation Department of Mathematical Sciences, University of Copenhagen, Copenhagen, Denmark

Laura Mančinska

Contributed equally to this work with: Andreas Bluhm, Matthias Christandl, Fulvio Gesmundo, Frederik Ravn Klausen, Laura Mančinska, Vincent Steffan, Daniel Stilck França, Albert H. Werner

Roles Conceptualization, Investigation, Writing – original draft

Affiliation Department of Mathematical Sciences, University of Copenhagen, Copenhagen, Denmark

Vincent Steffan

Contributed equally to this work with: Andreas Bluhm, Matthias Christandl, Fulvio Gesmundo, Frederik Ravn Klausen, Laura Mančinska, Vincent Steffan, Daniel Stilck França, Albert H. Werner

Roles Software, Visualization, Writing – original draft

Affiliation Department of Mathematical Sciences, University of Copenhagen, Copenhagen, Denmark

Daniel Stilck França

Contributed equally to this work with: Andreas Bluhm, Matthias Christandl, Fulvio Gesmundo, Frederik Ravn Klausen, Laura Mančinska, Vincent Steffan, Daniel Stilck França, Albert H. Werner

Roles Conceptualization, Methodology, Writing – original draft

Affiliation Department of Mathematical Sciences, University of Copenhagen, Copenhagen, Denmark

Albert H. Werner

Contributed equally to this work with: Andreas Bluhm, Matthias Christandl, Fulvio Gesmundo, Frederik Ravn Klausen, Laura Mančinska, Vincent Steffan, Daniel Stilck França, Albert H. Werner

Roles Conceptualization, Methodology, Writing – original draft

Affiliation Department of Mathematical Sciences, University of Copenhagen, Copenhagen, Denmark

Competing Interests

The authors have declared that no competing interests exist.

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Haplotypes
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Denmark
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Phylogenetic analysis
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SARS CoV 2
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Genomics
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Microbial mutation
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