RNA variant identification discrepancy among splice-aware alignment algorithms

Ji Hyung Hong; Yoon Ho Ko; Keunsoo Kang

doi:10.1371/journal.pone.0201822

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Open Access

Peer-reviewed

Research Article

RNA variant identification discrepancy among splice-aware alignment algorithms

Ji Hyung Hong,

Roles Conceptualization, Formal analysis, Resources, Writing – original draft

Affiliation Division of Oncology, Department of Internal Medicine, College of Medicine, The Catholic University of Korea, Seoul, Republic of Korea
⨯
Yoon Ho Ko ,

Roles Conceptualization, Investigation, Project administration, Supervision, Writing – original draft, Writing – review & editing

* E-mail: kangk1204@dankook.ac.kr (KK); koyoonho@catholic.ac.kr (YK)

Affiliations Division of Oncology, Department of Internal Medicine, College of Medicine, The Catholic University of Korea, Seoul, Republic of Korea, Cancer Research Institute, College of Medicine, The Catholic University of Korea, Seoul, Republic of Korea
⨯
Keunsoo Kang

Roles Conceptualization, Formal analysis, Funding acquisition, Investigation, Methodology, Project administration, Supervision, Visualization, Writing – original draft, Writing – review & editing

* E-mail: kangk1204@dankook.ac.kr (KK); koyoonho@catholic.ac.kr (YK)

Affiliation Department of Microbiology, College of Natural Sciences, Dankook University, Cheonan, Republic of Korea

http://orcid.org/0000-0003-0611-9320

⨯

RNA variant identification discrepancy among splice-aware alignment algorithms

Ji Hyung Hong,
Yoon Ho Ko,
Keunsoo Kang

Published: August 2, 2018
https://doi.org/10.1371/journal.pone.0201822

About the Authors

Ji Hyung Hong

Roles Conceptualization, Formal analysis, Resources, Writing – original draft

Affiliation Division of Oncology, Department of Internal Medicine, College of Medicine, The Catholic University of Korea, Seoul, Republic of Korea

Yoon Ho Ko

Roles Conceptualization, Investigation, Project administration, Supervision, Writing – original draft, Writing – review & editing

* E-mail: kangk1204@dankook.ac.kr (KK); koyoonho@catholic.ac.kr (YK)

Affiliations Division of Oncology, Department of Internal Medicine, College of Medicine, The Catholic University of Korea, Seoul, Republic of Korea, Cancer Research Institute, College of Medicine, The Catholic University of Korea, Seoul, Republic of Korea

Keunsoo Kang

Roles Conceptualization, Formal analysis, Funding acquisition, Investigation, Methodology, Project administration, Supervision, Visualization, Writing – original draft, Writing – review & editing

* E-mail: kangk1204@dankook.ac.kr (KK); koyoonho@catholic.ac.kr (YK)

Affiliation Department of Microbiology, College of Natural Sciences, Dankook University, Cheonan, Republic of Korea

http://orcid.org/0000-0003-0611-9320

Competing Interests

The authors have declared that no competing interests exist.

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RNA alignment
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RNA sequencing
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Breast cancer
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RNA analysis
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Sequence alignment
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RNA editing
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Cancers and neoplasms
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Algorithms
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