About the Authors

Alvaro A. Ordonez

Contributed equally to this work with: Alvaro A. Ordonez, Supriya Pokkali

Roles Conceptualization, Data curation, Formal analysis, Investigation, Methodology, Validation, Writing – original draft, Writing – review & editing

Affiliations Center for Tuberculosis Research, Johns Hopkins University School of Medicine, Baltimore, Maryland, United States of America, Center for Infection and Inflammation Imaging Research, Johns Hopkins University School of Medicine, Baltimore, Maryland, United States of America, Department of Pediatrics, Johns Hopkins University School of Medicine, Baltimore, Maryland, United States of America

Supriya Pokkali

Contributed equally to this work with: Alvaro A. Ordonez, Supriya Pokkali

Roles Conceptualization, Data curation, Formal analysis, Investigation, Methodology, Writing – review & editing

Affiliations Center for Tuberculosis Research, Johns Hopkins University School of Medicine, Baltimore, Maryland, United States of America, Center for Infection and Inflammation Imaging Research, Johns Hopkins University School of Medicine, Baltimore, Maryland, United States of America, Department of Pediatrics, Johns Hopkins University School of Medicine, Baltimore, Maryland, United States of America

Sunhwa Kim

Roles Conceptualization, Data curation, Formal analysis, Methodology, Writing – review & editing

Current address: Merck Research Laboratories, San Francisco, California, United States of America

Affiliation Gilead Sciences, Inc., Foster City, California, United States of America

Brian Carr

Roles Data curation, Investigation, Writing – review & editing

Affiliation Gilead Sciences, Inc., Foster City, California, United States of America

Mariah H. Klunk

Roles Investigation, Methodology, Writing – review & editing

Affiliations Center for Tuberculosis Research, Johns Hopkins University School of Medicine, Baltimore, Maryland, United States of America, Center for Infection and Inflammation Imaging Research, Johns Hopkins University School of Medicine, Baltimore, Maryland, United States of America, Department of Pediatrics, Johns Hopkins University School of Medicine, Baltimore, Maryland, United States of America

Leah Tong

Roles Investigation, Methodology, Writing – review & editing

Affiliation Gilead Sciences, Inc., Foster City, California, United States of America

Vikram Saini

Roles Data curation, Investigation, Writing – review & editing

Affiliations Center for Tuberculosis Research, Johns Hopkins University School of Medicine, Baltimore, Maryland, United States of America, Center for Infection and Inflammation Imaging Research, Johns Hopkins University School of Medicine, Baltimore, Maryland, United States of America, Department of Pediatrics, Johns Hopkins University School of Medicine, Baltimore, Maryland, United States of America

Yong S. Chang

Roles Investigation, Methodology, Writing – review & editing

Affiliations Center for Tuberculosis Research, Johns Hopkins University School of Medicine, Baltimore, Maryland, United States of America, Department of Pediatrics, Johns Hopkins University School of Medicine, Baltimore, Maryland, United States of America

Matthew McKevitt

Roles Conceptualization, Investigation, Methodology, Writing – review & editing

Affiliation Gilead Sciences, Inc., Foster City, California, United States of America

Victoria Smith

Roles Conceptualization, Investigation, Supervision, Writing – review & editing

Affiliation Gilead Sciences, Inc., Foster City, California, United States of America

David L. Gossage

Roles Formal analysis, Investigation, Methodology, Supervision, Validation, Writing – original draft, Writing – review & editing

Affiliation Gilead Sciences, Inc., Foster City, California, United States of America

Sanjay K. Jain

Roles Conceptualization, Formal analysis, Funding acquisition, Methodology, Resources, Supervision, Validation, Writing – original draft, Writing – review & editing

sjain5@jhmi.edu

Affiliations Center for Tuberculosis Research, Johns Hopkins University School of Medicine, Baltimore, Maryland, United States of America, Center for Infection and Inflammation Imaging Research, Johns Hopkins University School of Medicine, Baltimore, Maryland, United States of America, Department of Pediatrics, Johns Hopkins University School of Medicine, Baltimore, Maryland, United States of America

Competing Interests

The authors have the following competing interests: BC, LT, MM, VSmith and DLG report employment by and stock ownership in Gilead Sciences. SK was an employee of Gilead Sciences at the time the study was conducted and owns stocks in Gilead Sciences. This study was funded by a grant by Gilead Sciences to Johns Hopkins University. Gilead Sciences holds the patent ‘Antibodies to matrix metalloproteinase 9’ (US8501916 B2) and the patent application ‘Antibodies to matrix metalloproteinase 9’ (US20130281676 A1). None of these competing interests affect the authors' adherence to PLOS ONE policies regarding the sharing of data and materials associated with the submitted manuscript.