- Revisiting the origins of the Sobemovirus genus: A case for ancient origins of plant viruses
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Research Article | published 11 Jan 2024 PLOS Pathogens
https://doi.org/10.1371/journal.ppat.1011911
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- Characterising the epidemic spread of influenza A/H3N2 within a city through phylogenetics
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Research Article | published 19 Nov 2020 PLOS Pathogens
https://doi.org/10.1371/journal.ppat.1008984
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- Insertion and deletion evolution reflects antibiotics selection pressure in a Mycobacterium tuberculosis outbreak
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Research Article | published 30 Sep 2020 PLOS Pathogens
https://doi.org/10.1371/journal.ppat.1008357
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- Cross-feeding modulates the rate and mechanism of antibiotic resistance evolution in a model microbial community of Escherichia coli and Salmonella enterica
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Research Article | published 20 Jul 2020 PLOS Pathogens
https://doi.org/10.1371/journal.ppat.1008700
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- Antibiotic interactions shape short-term evolution of resistance in E. faecalis
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Research Article | published 02 Mar 2020 PLOS Pathogens
https://doi.org/10.1371/journal.ppat.1008278
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- Childhood immune imprinting to influenza A shapes birth year-specific risk during seasonal H1N1 and H3N2 epidemics
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Research Article | published 19 Dec 2019 PLOS Pathogens
https://doi.org/10.1371/journal.ppat.1008109
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- The molecular clock of Mycobacterium tuberculosis
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Research Article | published 12 Sep 2019 PLOS Pathogens
https://doi.org/10.1371/journal.ppat.1008067
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- Mutational pathway maps and founder effects define the within-host spectrum of hepatitis C virus mutants resistant to drugs
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Research Article | published 01 Apr 2019 PLOS Pathogens
https://doi.org/10.1371/journal.ppat.1007701
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- An unusually high substitution rate in transplant-associated BK polyomavirus in vivo is further concentrated in HLA-C-bound viral peptides
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Research Article | published 18 Oct 2018 PLOS Pathogens
https://doi.org/10.1371/journal.ppat.1007368
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- Evolution of HIV-1 within untreated individuals and at the population scale in Uganda
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Research Article | published 27 Jul 2018 PLOS Pathogens
https://doi.org/10.1371/journal.ppat.1007167
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- Quantifying the fitness cost of HIV-1 drug resistance mutations through phylodynamics
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Research Article | published 20 Feb 2018 PLOS Pathogens
https://doi.org/10.1371/journal.ppat.1006895
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- Large-Scale Phylogenomic Analysis Reveals the Complex Evolutionary History of Rabies Virus in Multiple Carnivore Hosts
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Research Article | published 15 Dec 2016 PLOS Pathogens
https://doi.org/10.1371/journal.ppat.1006041
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- Exceptional Heterogeneity in Viral Evolutionary Dynamics Characterises Chronic Hepatitis C Virus Infection
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Research Article | published 15 Sep 2016 PLOS Pathogens
https://doi.org/10.1371/journal.ppat.1005894
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- Ebolavirus Evolution: Past and Present
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Review | published 12 Nov 2015 PLOS Pathogens
https://doi.org/10.1371/journal.ppat.1005221
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- The Two-Phase Emergence of Non Pandemic HIV-1 Group O in Cameroon
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Research Article | published 04 Aug 2015 PLOS Pathogens
https://doi.org/10.1371/journal.ppat.1005029
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