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PLOS Computational Biology  
EpiFusion: Joint inference of the effective reproduction number by integrating phylodynamic and epidemiological modelling with particle filtering

Ciara Judge, Timothy Vaughan, Timothy Russell, Sam Abbott, Louis du Plessis, Tanja Stadler, Oliver Brady, Sarah Hill

Methods | published 11 Nov 2024 PLOS Computational Biology

https://doi.org/10.1371/journal.pcbi.1012528

Views: 889Citations: 0Saves: 3 • Shares: 1

Bridging the gap: Using reservoir ecology and human serosurveys to estimate Lassa virus spillover in West Africa

Andrew J. Basinski, Elisabeth Fichet-Calvet, Anna R. Sjodin, Tanner J. Varrelman, Christopher H. Remien, Nathan C. Layman, Brian H. Bird, David J. Wolking, Corina Monagin, Bruno M. Ghersi, Peter A. Barry, Michael A. Jarvis, Paul E. Gessler, Scott L. Nuismer

Research Article | published 03 Mar 2021 PLOS Computational Biology

https://doi.org/10.1371/journal.pcbi.1008811

Views: 4209Citations: 53Saves: 108 • Shares: 10

Assessing the performance of real-time epidemic forecasts: A case study of Ebola in the Western Area region of Sierra Leone, 2014-15

Sebastian Funk, Anton Camacho, Adam J. Kucharski, Rachel Lowe, Rosalind M. Eggo, W. John Edmunds

Research Article | published 11 Feb 2019 PLOS Computational Biology

https://doi.org/10.1371/journal.pcbi.1006785

Views: 9043Citations: 87Saves: 104 • Shares: 29

Spatiotemporal Analysis of the 2014 Ebola Epidemic in West Africa

Jantien A. Backer, Jacco Wallinga

Research Article | published 08 Dec 2016 PLOS Computational Biology

https://doi.org/10.1371/journal.pcbi.1005210

Views: 6711Citations: 43Saves: 71 • Shares: 13

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