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Mathematical modeling  
PLOS Computational Biology  
Understanding patient-derived tumor organoid growth through an integrated imaging and mathematical modeling framework

Einar Bjarki Gunnarsson, Seungil Kim, Brandon Choi, J. Karl Schmid, Karn Kaura, Heinz-Josef Lenz, Shannon M. Mumenthaler, Jasmine Foo

Research Article | published 02 Aug 2024 PLOS Computational Biology

https://doi.org/10.1371/journal.pcbi.1012256

Views: 2175Citations: 2Saves: 17 • Shares: 2

Marmosets mutually compensate for differences in rhythms when coordinating vigilance

Nikhil Phaniraj, Rahel K. Brügger, Judith M. Burkart

Research Article | published 15 May 2024 PLOS Computational Biology

https://doi.org/10.1371/journal.pcbi.1012104

Views: 1859Citations: 5Saves: 9 • Shares: 9

Ten steps to investigate a cellular system with mathematical modeling

Jasia King, Kerbaï Saïd Eroumé, Roman Truckenmüller, Stefan Giselbrecht, Ann E. Cowan, Leslie Loew, Aurélie Carlier

Education | published 13 May 2021 PLOS Computational Biology

https://doi.org/10.1371/journal.pcbi.1008921

Views: 5049Citations: 10Saves: 54 • Shares: 12

A mathematical model of the role of aggregation in sonic hedgehog signalling

Daniel J. A. Derrick, Kathryn Wolton, Richard A. Currie, Marcus John Tindall

Research Article | published 22 Feb 2021 PLOS Computational Biology

https://doi.org/10.1371/journal.pcbi.1008562

Views: 1979Citations: 0Saves: 9 • Shares: 2

Ten simple rules for tackling your first mathematical models: A guide for graduate students by graduate students

Korryn Bodner, Chris Brimacombe, Emily S. Chenery, Ariel Greiner, Anne M. McLeod, Stephanie R. Penk, Juan S. Vargas Soto

Editorial | published 14 Jan 2021 PLOS Computational Biology

https://doi.org/10.1371/journal.pcbi.1008539

Views: 25578Citations: 9Saves: 282 • Shares: 331

Quantification of Ebola virus replication kinetics in vitro

Laura E. Liao, Jonathan Carruthers, Sophie J. Smither, CL4 Virology Team , Simon A. Weller, Diane Williamson, Thomas R. Laws, Isabel García-Dorival, Julian Hiscox, Benjamin P. Holder, Catherine A. A. Beauchemin, Alan S. Perelson, Martín López-García, Grant Lythe, John N. Barr, Carmen Molina-París

Research Article | published 02 Nov 2020 PLOS Computational Biology

https://doi.org/10.1371/journal.pcbi.1008375

Views: 4558Citations: 14Saves: 37 • Shares: 4

Perspective: Dimensions of the scientific method

Eberhard O. Voit

Perspective | published 12 Sep 2019 PLOS Computational Biology

https://doi.org/10.1371/journal.pcbi.1007279

Views: 35825Citations: 48Saves: 259 • Shares: 31

Horizontal transfer between loose compartments stabilizes replication of fragmented ribozymes

Atsushi Kamimura, Yoshiya J. Matsubara, Kunihiko Kaneko, Nobuto Takeuchi

Research Article | published 06 Jun 2019 PLOS Computational Biology

https://doi.org/10.1371/journal.pcbi.1007094

Views: 2666Citations: 10Saves: 18 • Shares: 7

Quantitative analysis reveals crosstalk mechanisms of heat shock-induced attenuation of NF-κB signaling at the single cell level

Małgorzata Kardyńska, Anna Paszek, Jarosław Śmieja, David Spiller, Wiesława Widłak, Michael R. H. White, Pawel Paszek, Marek Kimmel

Research Article | published 30 Apr 2018 PLOS Computational Biology

https://doi.org/10.1371/journal.pcbi.1006130

Views: 4250Citations: 18Saves: 24 • Shares: 5

Survival Kinetics of Starving Bacteria Is Biphasic and Density-Dependent

Andy Phaiboun, Yiming Zhang, Boryung Park, Minsu Kim

Research Article | published 02 Apr 2015 PLOS Computational Biology

https://doi.org/10.1371/journal.pcbi.1004198

Views: 7615Citations: 55Saves: 100 • Shares: 1

Synthetic Lethality between Gene Defects Affecting a Single Non-essential Molecular Pathway with Reversible Steps

Andrei Zinovyev, Inna Kuperstein, Emmanuel Barillot, Wolf-Dietrich Heyer

Research Article | published 04 Apr 2013 PLOS Computational Biology

https://doi.org/10.1371/journal.pcbi.1003016

Views: 6263Citations: 30Saves: 76 • Shares: 2

Translational Systems Biology of Inflammation

Yoram Vodovotz, Marie Csete, John Bartels, Steven Chang, Gary An

Review | published 25 Apr 2008 PLOS Computational Biology

https://doi.org/10.1371/journal.pcbi.1000014

Views: 14597Citations: 213Saves: 218 • Shares: 0

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