- Bacterial clustering amplifies the reshaping of eutrophic plumes around marine particles: A hybrid data-driven model
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Research Article | published 11 Dec 2024 PLOS Computational Biology
https://doi.org/10.1371/journal.pcbi.1012660
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- CLAW: An automated Snakemake workflow for the assembly of chloroplast genomes from long-read data
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Methods | published 09 Feb 2024 PLOS Computational Biology
https://doi.org/10.1371/journal.pcbi.1011870
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- Modelling the acclimation capacity of coral reefs to a warming ocean
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Research Article | published 09 May 2022 PLOS Computational Biology
https://doi.org/10.1371/journal.pcbi.1010099
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- Understanding photosynthetic biofilm productivity and structure through 2D simulation
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Research Article | published 04 Apr 2022 PLOS Computational Biology
https://doi.org/10.1371/journal.pcbi.1009904
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- A Bayesian approach to modeling phytoplankton population dynamics from size distribution time series
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Research Article | published 14 Jan 2022 PLOS Computational Biology
https://doi.org/10.1371/journal.pcbi.1009733
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- Twelve quick tips for designing sound dynamical models for bioprocesses
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Education | published 22 Aug 2019 PLOS Computational Biology
https://doi.org/10.1371/journal.pcbi.1007222
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- Synchrony is more than its top-down and climatic parts: interacting Moran effects on phytoplankton in British seas
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Research Article | published 28 Mar 2019 PLOS Computational Biology
https://doi.org/10.1371/journal.pcbi.1006744
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- Traceability, reproducibility and wiki-exploration for “à-la-carte” reconstructions of genome-scale metabolic models
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Research Article | published 23 May 2018 PLOS Computational Biology
https://doi.org/10.1371/journal.pcbi.1006146
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- Effects of growth rate, cell size, motion, and elemental stoichiometry on nutrient transport kinetics
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Research Article | published 27 Apr 2018 PLOS Computational Biology
https://doi.org/10.1371/journal.pcbi.1006118
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- Meneco, a Topology-Based Gap-Filling Tool Applicable to Degraded Genome-Wide Metabolic Networks
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Research Article | published 27 Jan 2017 PLOS Computational Biology
https://doi.org/10.1371/journal.pcbi.1005276
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- Understanding the Sub-Cellular Dynamics of Silicon Transportation and Synthesis in Diatoms Using Population-Level Data and Computational Optimization
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Research Article | published 19 Jun 2014 PLOS Computational Biology
https://doi.org/10.1371/journal.pcbi.1003687
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- Simulations of Long-Term Community Dynamics in Coral Reefs - How Perturbations Shape Trajectories
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Research Article | published 29 Nov 2012 PLOS Computational Biology
https://doi.org/10.1371/journal.pcbi.1002791
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