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A how-to guide for code sharing in biology

Richard J. Abdill, Emma Talarico, Laura Grieneisen

Essay | published 10 Sep 2024 PLOS Biology

https://doi.org/10.1371/journal.pbio.3002815

Views: 2140Citations: 2Saves: 13 • Shares: 8

Nuclear reassembly defects after mitosis trigger apoptotic and p53-dependent safeguard mechanisms in Drosophila

Jingjing Li, Laia Jordana, Haytham Mehsen, Xinyue Wang, Vincent Archambault

Research Article | published 26 Aug 2024 PLOS Biology

https://doi.org/10.1371/journal.pbio.3002780

Views: 1351Citations: 3Saves: 6 • Shares: 0

CellTracksColab is a platform that enables compilation, analysis, and exploration of cell tracking data

Estibaliz Gómez-de-Mariscal, Hanna Grobe, Joanna W. Pylvänäinen, Laura Xénard, Ricardo Henriques, Jean-Yves Tinevez, Guillaume Jacquemet

Methods and Resources | published 08 Aug 2024 PLOS Biology

https://doi.org/10.1371/journal.pbio.3002740

Views: 2752Citations: 6Saves: 14 • Shares: 11

“Best Paper” awards lack transparency, inclusivity, and support for Open Science

Malgorzata Lagisz, Joanna Rutkowska, Upama Aich, Robert M. Ross, Manuela S. Santana, Joshua Wang, Nina Trubanová, Matthew J. Page, Andrew Adrian Yu Pua, Yefeng Yang, Bawan Amin, April Robin Martinig, Adrian Barnett, Aswathi Surendran, Ju Zhang, David N. Borg, Jafsia Elisee, James G. Wrightson, Shinichi Nakagawa

Meta-Research Article | published 23 Jul 2024 PLOS Biology

https://doi.org/10.1371/journal.pbio.3002715

Views: 2501Citations: 2Saves: 9 • Shares: 7

Imaging lifespan brain structural growth: From region, to connectome, to gradient

Xing Qian, Juan Helen Zhou

Primer | published 21 Jun 2024 PLOS Biology

https://doi.org/10.1371/journal.pbio.3002669

Views: 1471Citations: 1Saves: 6 • Shares: 3

Blik is an extensible 3D visualisation tool for the annotation and analysis of cryo-electron tomography data

Lorenzo Gaifas, Moritz A. Kirchner, Joanna Timmins, Irina Gutsche

Methods and Resources | published 30 Apr 2024 PLOS Biology

https://doi.org/10.1371/journal.pbio.3002447

Views: 1782Citations: 5Saves: 3 • Shares: 7

Polarised cell intercalation during Drosophila axis extension is robust to an orthogonal pull by the invaginating mesoderm

Claire M. Lye, Guy B. Blanchard, Jenny Evans, Alexander Nestor-Bergmann, Bénédicte Sanson

Research Article | published 29 Apr 2024 PLOS Biology

https://doi.org/10.1371/journal.pbio.3002611

Views: 1598Citations: 4Saves: 4 • Shares: 18

A chemical signal in human female tears lowers aggression in males

Shani Agron, Claire A. de March, Reut Weissgross, Eva Mishor, Lior Gorodisky, Tali Weiss, Edna Furman-Haran, Hiroaki Matsunami, Noam Sobel

Short Reports | published 21 Dec 2023 PLOS Biology

https://doi.org/10.1371/journal.pbio.3002442

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Protein nanobarcodes enable single-step multiplexed fluorescence imaging

Daniëlle de Jong-Bolm, Mohsen Sadeghi, Cristian A. Bogaciu, Guobin Bao, Gabriele Klaehn, Merle Hoff, Lucas Mittelmeier, F. Buket Basmanav, Felipe Opazo, Frank Noé, Silvio O. Rizzoli

Methods and Resources | published 11 Dec 2023 PLOS Biology

https://doi.org/10.1371/journal.pbio.3002427

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Topological data analysis reveals a core gene expression backbone that defines form and function across flowering plants

Sourabh Palande, Joshua A. M. Kaste, Miles D. Roberts, Kenia Segura Abá, Carly Claucherty, Jamell Dacon, Rei Doko, Thilani B. Jayakody, Hannah R. Jeffery, Nathan Kelly, Andriana Manousidaki, Hannah M. Parks, Emily M. Roggenkamp, Ally M. Schumacher, Jiaxin Yang, Sarah Percival, Jeremy Pardo, Aman Y. Husbands, Arjun Krishnan, Beronda L Montgomery, Elizabeth Munch, Addie M. Thompson, Alejandra Rougon-Cardoso, Daniel H. Chitwood, Robert VanBuren

Research Article | published 05 Dec 2023 PLOS Biology

https://doi.org/10.1371/journal.pbio.3002397

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A simple Turing reaction–diffusion model explains how PLK4 breaks symmetry during centriole duplication and assembly

Zachary M. Wilmott, Alain Goriely, Jordan W. Raff

Research Article | published 20 Nov 2023 PLOS Biology

https://doi.org/10.1371/journal.pbio.3002391

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Brn3b regulates the formation of fear-related midbrain circuits and defensive responses to visual threat

Hyoseo Lee, Hannah Weinberg-Wolf, Hae-Lim Lee, Tracy Lee, Joseph Conte, Carlos Godoy-Parejo, Jonathan B. Demb, Andrii Rudenko, In-Jung Kim

Research Article | published 20 Nov 2023 PLOS Biology

https://doi.org/10.1371/journal.pbio.3002386

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scapGNN: A graph neural network–based framework for active pathway and gene module inference from single-cell multi-omics data

Xudong Han, Bing Wang, Chenghao Situ, Yaling Qi, Hui Zhu, Yan Li, Xuejiang Guo

Methods and Resources | published 13 Nov 2023 PLOS Biology

https://doi.org/10.1371/journal.pbio.3002369

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Piezo1-mediated spontaneous calcium transients in satellite glia impact dorsal root ganglia development

Jacob P. Brandt, Cody J. Smith

Short Reports | published 25 Sep 2023 PLOS Biology

https://doi.org/10.1371/journal.pbio.3002319

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Editorial Note: The Communication Factor EDF and the Toxin–Antitoxin Module mazEF Determine the Mode of Action of Antibiotics

The PLOS Biology Editors

Editorial Note | published 18 Sep 2023 PLOS Biology

https://doi.org/10.1371/journal.pbio.3002325

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