Profile Hidden Markov Models for the Detection of Viruses within Metagenomic Sequence Data

• Peter Skewes-Cox,

  Current address: Novartis Institutes for BioMedical Research, Emeryville, California, United States of America

  Affiliations Biological and Medical Informatics Graduate Program, University of California San Francisco, San Francisco, California, United States of America, Departments of Medicine, Biochemistry and Biophysics, and Microbiology, University of California San Francisco, San Francisco, California, United States of America, Howard Hughes Medical Institute, Bethesda, Maryland, United States of America

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• Thomas J. Sharpton,

  Current address: Department of Microbiology, Oregon State University, Corvallis, Oregon, United States of America

  Affiliation The J. David Gladstone Institutes, University of California San Francisco, San Francisco, California, United States of America

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• Katherine S. Pollard,

  Affiliations The J. David Gladstone Institutes, University of California San Francisco, San Francisco, California, United States of America, Institute for Human Genetics & Division of Biostatistics, University of California San Francisco, San Francisco, California, United States of America

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• Joseph L. DeRisi

  * E-mail: joe@derisilab.ucsf.edu

  Affiliations Departments of Medicine, Biochemistry and Biophysics, and Microbiology, University of California San Francisco, San Francisco, California, United States of America, Howard Hughes Medical Institute, Bethesda, Maryland, United States of America

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