Comparison of Pattern Detection Methods in Microarray Time Series of the Segmentation Clock

Mary-Lee Dequéant; Sebastian Ahnert; Herbert Edelsbrunner; Thomas M. A. Fink; Earl F. Glynn; Gaye Hattem; Andrzej Kudlicki; Yuriy Mileyko; Jason Morton; Arcady R. Mushegian; Lior Pachter; Maga Rowicka; Anne Shiu; Bernd Sturmfels; Olivier Pourquié

doi:10.1371/journal.pone.0002856

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Open Access

Peer-reviewed

Research Article

Comparison of Pattern Detection Methods in Microarray Time Series of the Segmentation Clock

Mary-Lee Dequéant,

Affiliation Stowers Institute for Medical Research, Kansas City, Missouri, United States of America
⨯
Sebastian Ahnert,

Affiliation Theory of Condensed Matter, Cavendish Laboratory, Cambridge, United Kingdom
⨯
Herbert Edelsbrunner,

Affiliations Department of Computer Science, Duke University, Durham, North Carolina, United States of America, Department of Mathematics, Duke University, Durham, North Carolina, United States of America, Geomagic, Research Triangle Park, North Carolina, United States of America
⨯
Thomas M. A. Fink,

Affiliations INSERM U900, Paris, France, CNRS UMR 144 Curie Institute, Paris, France, Ecole des Mines de Paris, Paris Tech, Fontainebleau, France
⨯
Earl F. Glynn,

Affiliation Stowers Institute for Medical Research, Kansas City, Missouri, United States of America
⨯
Gaye Hattem,

Affiliation Stowers Institute for Medical Research, Kansas City, Missouri, United States of America
⨯
Andrzej Kudlicki,

Affiliation Department of Biochemistry, University of Texas Southwestern Medical Center, Dallas, Texas, United States of America
⨯
Yuriy Mileyko,

Affiliation Department of Computer Science, Duke University, Durham, North Carolina, United States of America
⨯
Jason Morton,

Affiliation Department of Mathematics, University of California, Berkeley, California, United States of America
⨯
Arcady R. Mushegian,

Affiliation Stowers Institute for Medical Research, Kansas City, Missouri, United States of America
⨯
Lior Pachter,

Affiliation Department of Mathematics, University of California, Berkeley, California, United States of America
⨯
Maga Rowicka,

Affiliation Department of Biochemistry, University of Texas Southwestern Medical Center, Dallas, Texas, United States of America
⨯
Anne Shiu,

Affiliation Department of Mathematics, University of California, Berkeley, California, United States of America
⨯
Bernd Sturmfels,

Affiliation Department of Mathematics, University of California, Berkeley, California, United States of America
⨯
Olivier Pourquié

* E-mail: olp@stowers-institute.org

Affiliations Stowers Institute for Medical Research, Kansas City, Missouri, United States of America, Howard Hughes Medical Institute, Kansas City, Missouri, United States of America
⨯

Comparison of Pattern Detection Methods in Microarray Time Series of the Segmentation Clock

Mary-Lee Dequéant,
Sebastian Ahnert,
Herbert Edelsbrunner,
Thomas M. A. Fink,
Earl F. Glynn,
Gaye Hattem,
Andrzej Kudlicki,
Yuriy Mileyko,
Jason Morton,
Arcady R. Mushegian

Published: August 6, 2008
https://doi.org/10.1371/journal.pone.0002856

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